compare_peaks
caitlinpage
2024-09-04
Last updated: 2024-10-07
Checks: 7 0
Knit directory: damsel_paper/analysis/
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Introduction
library(Damsel)
library(plyranges)Loading required package: BiocGenerics
Attaching package: 'BiocGenerics'The following objects are masked from 'package:stats':
IQR, mad, sd, var, xtabsThe following objects are masked from 'package:base':
anyDuplicated, aperm, append, as.data.frame, basename, cbind,
colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find,
get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply,
match, mget, order, paste, pmax, pmax.int, pmin, pmin.int,
Position, rank, rbind, Reduce, rownames, sapply, setdiff, table,
tapply, union, unique, unsplit, which.max, which.minLoading required package: IRangesWarning: package 'IRanges' was built under R version 4.4.1Loading required package: S4VectorsWarning: package 'S4Vectors' was built under R version 4.4.1Loading required package: stats4
Attaching package: 'S4Vectors'The following object is masked from 'package:utils':
findMatchesThe following objects are masked from 'package:base':
expand.grid, I, unnameLoading required package: GenomicRangesLoading required package: GenomeInfoDb
Attaching package: 'plyranges'The following object is masked from 'package:IRanges':
sliceThe following object is masked from 'package:stats':
filterlibrary(dplyr)
Attaching package: 'dplyr'The following objects are masked from 'package:plyranges':
between, n, n_distinctThe following objects are masked from 'package:GenomicRanges':
intersect, setdiff, unionThe following object is masked from 'package:GenomeInfoDb':
intersectThe following objects are masked from 'package:IRanges':
collapse, desc, intersect, setdiff, slice, unionThe following objects are masked from 'package:S4Vectors':
first, intersect, rename, setdiff, setequal, unionThe following objects are masked from 'package:BiocGenerics':
combine, intersect, setdiff, unionThe following objects are masked from 'package:stats':
filter, lagThe following objects are masked from 'package:base':
intersect, setdiff, setequal, unionlibrary(tidyr)
Attaching package: 'tidyr'The following object is masked from 'package:S4Vectors':
expandlibrary(ggplot2)
library(BSgenome.Dmelanogaster.UCSC.dm6)Loading required package: BSgenomeLoading required package: BiostringsLoading required package: XVector
Attaching package: 'Biostrings'The following object is masked from 'package:base':
strsplitLoading required package: BiocIOLoading required package: rtracklayer
Attaching package: 'rtracklayer'The following object is masked from 'package:BiocIO':
FileForFormatlibrary(TxDb.Dmelanogaster.UCSC.dm6.ensGene)Loading required package: GenomicFeaturesLoading required package: AnnotationDbiLoading required package: BiobaseWelcome to Bioconductor
Vignettes contain introductory material; view with
'browseVignettes()'. To cite Bioconductor, see
'citation("Biobase")', and for packages 'citation("pkgname")'.
Attaching package: 'AnnotationDbi'The following object is masked from 'package:dplyr':
selectThe following object is masked from 'package:plyranges':
selectlibrary(org.Dm.eg.db)library(ggVennDiagram)
Attaching package: 'ggVennDiagram'The following object is masked from 'package:tidyr':
unitelibrary(rtracklayer)Compare Damsel and Vissers
damsel_peaks <- readRDS("../output/damsel_peaks.rds")
vissers_peaks <- readRDS("../output/vissers_peaks.rds")
vissers_peaks_mod <- readRDS("../output/vissers_peaks_mod.rds")nrow(damsel_peaks)[1] 3120nrow(vissers_peaks)[1] 2286- Visser’s peaks had to be modified in order to be usable (missing chromosome name)
- They also do not contain a p value - making it difficult to rank peaks and identify the most significant
vissers_peaks_mod$peak_num <- 1:nrow(vissers_peaks_mod)
vissers_peaks_mod$Position <- paste0(vissers_peaks_mod$seqnames, "-", vissers_peaks_mod$start)peak_all <- union_ranges(as_granges(damsel_peaks), as_granges(vissers_peaks_mod)) %>%
data.frame() %>% mutate(compare_num = 1:n())
peak_compare_damsel <- find_overlaps(as_granges(peak_all), as_granges(damsel_peaks)) %>% data.frame()
peak_compare_vissers <- find_overlaps(as_granges(peak_all), as_granges(vissers_peaks_mod)) %>% data.frame()venn_data <- list(Damsel = peak_compare_damsel$compare_num, Vissers = peak_compare_vissers$compare_num)
ggVennDiagram(venn_data)
| Version | Author | Date |
|---|---|---|
| 9c649c4 | caitlinpage | 2024-10-01 |
Compare Damsel and Marshall
marshall_peaks_1 <- rtracklayer::import("../data/sd_1_SRR794884-vs-Dam.kde-norm.gatc-FDR0.01.peaks.gff")
marshall_peaks_2 <- rtracklayer::import("../data/sd_2_SRR7948877-vs-Dam.kde-norm.gatc-FDR0.01.peaks.gff")
marshall_peaks <- readRDS("../output/marshall_peaks.rds")head(marshall_peaks_1)GRanges object with 6 ranges and 5 metadata columns:
seqnames ranges strand | source type score phase
<Rle> <IRanges> <Rle> | <factor> <factor> <numeric> <integer>
[1] 2L 71990-73420 * | NA NA 1.99 <NA>
[2] 2L 128081-131214 * | NA NA 2.10 <NA>
[3] 2L 153858-155437 * | NA NA 2.13 <NA>
[4] 2L 178291-180711 * | NA NA 2.64 <NA>
[5] 2L 454087-456365 * | NA NA 1.28 <NA>
[6] 2L 1054665-1056694 * | NA NA 2.11 <NA>
FDR
<character>
[1] 0.00722203739243461
[2] 9.74130844090044e-05
[3] 0.00722203739243461
[4] 4.98769409283497e-07
[5] 0.000523003066327455
[6] 1.42029958212876e-08
-------
seqinfo: 7 sequences from an unspecified genome; no seqlengthshead(marshall_peaks_2)GRanges object with 6 ranges and 5 metadata columns:
seqnames ranges strand | source type score phase
<Rle> <IRanges> <Rle> | <factor> <factor> <numeric> <integer>
[1] 2L 65673-67905 * | NA NA 2.16 <NA>
[2] 2L 71492-76602 * | NA NA 3.11 <NA>
[3] 2L 93377-95662 * | NA NA 2.42 <NA>
[4] 2L 107819-110289 * | NA NA 1.41 <NA>
[5] 2L 125703-131214 * | NA NA 3.25 <NA>
[6] 2L 153858-155609 * | NA NA 3.26 <NA>
FDR
<character>
[1] 0.000144173134011161
[2] 1.01370808975688e-06
[3] 1.32989250846386e-05
[4] 1.32989250846386e-05
[5] 6.29805566732406e-07
[6] 0.000828993724568052
-------
seqinfo: 6 sequences from an unspecified genome; no seqlengths- Marshall peaks had to be compiled in order to be analysed
- see
code/compile-Marshall_peaks.R
marshall_peaks seqnames start end width strand num FDR score rank_fdr
992 chr3R 121118 168978 47861 * 992 3.669822e-188 2.91 1
1004 chr3R 312717 330051 17335 * 1004 4.125879e-114 2.70 2
1002 chr3R 277392 292516 15125 * 1002 4.548980e-81 2.57 3
979 chr3L 24617794 24650494 32701 * 979 1.854938e-72 3.83 4
1003 chr3R 292561 305623 13063 * 1003 1.740067e-66 2.66 5
988 chr3R 276 31108 30833 * 988 7.983575e-61 3.50 6
978 chr3L 24602164 24616917 14754 * 978 3.693998e-59 3.14 7
1000 chr3R 259432 267537 8106 * 1000 3.921005e-52 2.66 8
993 chr3R 172735 177456 4722 * 993 7.996504e-36 2.84 9
995 chr3R 210129 219335 9207 * 995 7.996504e-36 2.51 10
760 chr3L 10296670 10312387 15718 * 760 1.067502e-31 3.69 11
512 chr2R 19792043 19800959 8917 * 512 4.267007e-31 3.04 12
982 chr3L 26936435 26945442 9008 * 982 5.237975e-31 2.57 13
222 chr2L 17573608 17591473 17866 * 222 8.053568e-31 3.39 14
417 chr2R 13328893 13344322 15430 * 417 8.053568e-31 3.67 15
40 chr2L 1963519 1974361 10843 * 40 8.927585e-28 3.61 16
302 chr2R 6589997 6600669 10673 * 302 1.400561e-26 3.89 17
1591 chrX 10729524 10742905 13382 * 1591 1.400561e-26 3.07 18
1054 chr3R 7099597 7106843 7247 * 1054 2.113253e-25 3.19 19
1353 chr3R 29699651 29709127 9477 * 1353 2.113253e-25 4.23 20
1371 chr3R 30407813 30421705 13893 * 1371 2.113253e-25 3.70 21
1033 chr3R 5115948 5124072 8125 * 1033 2.424335e-24 3.24 22
1243 chr3R 21632070 21639020 6951 * 1243 2.424335e-24 3.40 23
678 chr3L 3972804 3984784 11981 * 678 7.174364e-24 2.56 24
876 chr3L 17361070 17368225 7156 * 876 3.230997e-23 3.23 25
1307 chr3R 25628150 25631815 3666 * 1307 3.230997e-23 3.11 26
870 chr3L 16763420 16771125 7706 * 870 8.118844e-23 2.34 27
1470 chrX 2133933 2141277 7345 * 1470 8.118844e-23 3.09 28
1134 chr3R 12475529 12483185 7657 * 1134 1.523226e-22 2.74 29
1366 chr3R 30268400 30279342 10943 * 1366 1.523226e-22 2.15 30
636 chr3L 903309 909991 6683 * 636 4.641826e-22 2.96 31
364 chr2R 10541326 10548959 7634 * 364 1.470026e-21 3.32 32
395 chr2R 12455135 12464155 9021 * 395 1.470026e-21 3.54 33
1072 chr3R 9029151 9036138 6988 * 1072 1.470026e-21 3.29 34
1220 chr3R 20765400 20772148 6749 * 1220 1.470026e-21 3.48 35
240 chr2L 19133133 19141871 8739 * 240 3.030862e-21 3.37 36
594 chr2R 25257195 25262033 4839 * 594 5.034877e-21 3.16 37
1001 chr3R 268799 271539 2741 * 1001 5.034877e-21 2.67 38
994 chr3R 185299 189994 4696 * 994 5.405711e-21 2.65 39
986 chr3L 27068379 27077723 9345 * 986 1.582982e-19 3.59 40
1245 chr3R 21641174 21645372 4199 * 1245 1.603991e-19 2.91 41
985 chr3L 27006528 27011663 5136 * 985 2.942606e-19 2.82 42
398 chr2R 12585793 12595171 9379 * 398 7.952218e-19 3.34 43
868 chr3L 16742278 16749324 7047 * 868 1.255033e-18 3.30 44
225 chr2L 17742536 17755864 13329 * 225 5.245587e-18 3.10 45
146 chr2L 9451508 9459795 8288 * 146 9.468360e-18 3.97 46
335 chr2R 8245642 8250215 4574 * 335 9.468360e-18 3.01 47
360 chr2R 10263017 10267145 4129 * 360 9.468360e-18 4.35 48
558 chr2R 22861893 22865466 3574 * 558 9.468360e-18 2.89 49
631 chr3L 791951 798141 6191 * 631 9.468360e-18 3.12 50
1533 chrX 6854432 6863849 9418 * 1533 9.468360e-18 2.47 51
1620 chrX 12732879 12745376 12498 * 1620 9.468360e-18 2.59 52
998 chr3R 237854 240221 2368 * 998 2.579684e-17 2.35 53
635 chr3L 898076 902892 4817 * 635 3.044565e-17 4.07 54
165 chr2L 11295409 11303147 7739 * 165 7.761809e-17 3.32 55
348 chr2R 9546263 9552054 5792 * 348 7.761809e-17 3.54 56
212 chr2L 16281437 16287665 6229 * 212 8.477465e-17 2.59 57
879 chr3L 17991080 17993960 2881 * 879 8.477465e-17 2.68 58
362 chr2R 10532360 10536977 4618 * 362 1.753337e-16 2.65 59
413 chr2R 13190692 13196682 5991 * 413 1.753337e-16 3.54 60
484 chr2R 17456002 17462343 6342 * 484 1.753337e-16 3.42 61
529 chr2R 21031122 21037396 6275 * 529 1.753337e-16 2.49 62
637 chr3L 910036 917048 7013 * 637 1.753337e-16 4.82 63
1188 chr3R 17705791 17715843 10053 * 1188 1.753337e-16 3.70 64
1376 chr3R 30755869 30763540 7672 * 1376 1.753337e-16 2.72 65
997 chr3R 234341 236887 2547 * 997 8.453194e-16 2.78 66
252 chr2L 19569751 19577937 8187 * 252 1.100248e-15 4.44 67
946 chr3L 21878807 21885300 6494 * 946 1.100248e-15 3.51 68
1092 chr3R 10349884 10358406 8523 * 1092 1.100248e-15 3.57 69
1435 chrX 518841 525519 6679 * 1435 1.100248e-15 3.18 70
1653 chrX 15816540 15820647 4108 * 1653 1.100248e-15 3.77 71
295 chr2R 6143939 6148560 4622 * 295 1.525720e-15 3.56 72
977 chr3L 24593219 24597522 4304 * 977 1.696142e-15 2.92 73
686 chr3L 4251331 4256532 5202 * 686 1.767757e-15 3.16 74
1135 chr3R 12486401 12491739 5339 * 1135 1.767757e-15 2.62 75
565 chr2R 23569031 23577226 8196 * 565 2.446526e-15 2.75 76
1291 chr3R 24597377 24602826 5450 * 1291 2.446526e-15 2.64 77
1521 chrX 5884514 5889923 5410 * 1521 2.446526e-15 3.42 78
7 chr2L 157499 169128 11630 * 7 3.968315e-15 2.76 79
390 chr2R 12014614 12020157 5544 * 390 3.968315e-15 2.84 80
585 chr2R 24726871 24742081 15211 * 585 3.968315e-15 2.46 81
607 chr3L 266512 273843 7332 * 607 3.968315e-15 2.93 82
755 chr3L 10232290 10237588 5299 * 755 3.968315e-15 3.09 83
781 chr3L 11397576 11404691 7116 * 781 3.968315e-15 2.71 84
965 chr3L 22585214 22591994 6781 * 965 3.968315e-15 2.62 85
447 chr2R 15127782 15132140 4359 * 447 2.080712e-14 3.26 86
1117 chr3R 11614937 11619743 4807 * 1117 2.080712e-14 2.11 87
71 chr2L 4128417 4135125 6709 * 71 2.503991e-14 2.66 88
550 chr2R 22500174 22508592 8419 * 550 2.503991e-14 3.58 89
659 chr3L 2859383 2867531 8149 * 659 2.503991e-14 2.43 90
738 chr3L 8455419 8463141 7723 * 738 2.503991e-14 2.98 91
928 chr3L 21006574 21012444 5871 * 928 2.503991e-14 3.19 92
182 chr2L 13867793 13871728 3936 * 182 2.730809e-14 3.46 93
301 chr2R 6584692 6588516 3825 * 301 2.730809e-14 3.11 94
548 chr2R 22401832 22409315 7484 * 548 2.730809e-14 2.81 95
556 chr2R 22679849 22687204 7356 * 556 2.730809e-14 3.68 96
816 chr3L 13644941 13650645 5705 * 816 2.730809e-14 3.20 97
1067 chr3R 8843881 8848832 4952 * 1067 2.730809e-14 3.59 98
1154 chr3R 14720945 14724164 3220 * 1154 2.730809e-14 3.73 99
1339 chr3R 28855937 28859291 3355 * 1339 2.730809e-14 2.44 100
234 chr2L 18920593 18927179 6587 * 234 3.765586e-14 3.11 101
336 chr2R 8339576 8346103 6528 * 336 3.765586e-14 2.53 102
168 chr2L 11803366 11808578 5213 * 168 3.799157e-14 1.39 103
981 chr3L 26877787 26882000 4214 * 981 3.799157e-14 2.64 104
1432 chrX 455789 458142 2354 * 1432 3.799157e-14 2.74 105
89 chr2L 6076728 6083324 6597 * 89 4.116502e-14 3.27 106
199 chr2L 15433936 15437848 3913 * 199 4.116502e-14 3.59 107
353 chr2R 9710919 9715860 4942 * 353 4.116502e-14 3.53 108
767 chr3L 10676306 10685159 8854 * 767 4.116502e-14 1.71 109
838 chr3L 15098321 15103307 4987 * 838 4.116502e-14 3.54 110
1115 chr3R 11368683 11373447 4765 * 1115 4.116502e-14 4.49 111
1218 chr3R 20591599 20594993 3395 * 1218 4.116502e-14 2.36 112
1269 chr3R 23235615 23245512 9898 * 1269 4.116502e-14 2.43 113
1341 chr3R 29083700 29093759 10060 * 1341 4.116502e-14 2.04 114
1433 chrX 458205 461386 3182 * 1433 4.116502e-14 3.06 115
1479 chrX 2395257 2399400 4144 * 1479 4.116502e-14 3.81 116
768 chr3L 10769011 10772592 3582 * 768 4.590325e-14 2.07 117
1136 chr3R 12496039 12502771 6733 * 1136 4.590325e-14 2.65 118
702 chr3L 5968848 5977217 8370 * 702 5.490780e-13 2.90 119
1198 chr3R 18259733 18268527 8795 * 1198 5.490780e-13 2.56 120
1350 chr3R 29369631 29377943 8313 * 1350 5.490780e-13 3.63 121
1601 chrX 11626587 11633212 6626 * 1601 5.490780e-13 2.58 122
34 chr2L 1667629 1671333 3705 * 34 5.842377e-13 2.95 123
226 chr2L 18364254 18371752 7499 * 226 5.842377e-13 2.43 124
1498 chrX 3685270 3695234 9965 * 1498 5.842377e-13 2.46 125
30 chr2L 1465659 1471345 5687 * 30 8.944176e-13 2.82 126
107 chr2L 7422224 7427803 5580 * 107 8.944176e-13 2.47 127
176 chr2L 13511030 13516024 4995 * 176 8.944176e-13 3.24 128
444 chr2R 14953480 14961471 7992 * 444 8.944176e-13 1.97 129
452 chr2R 15377966 15382456 4491 * 452 8.944176e-13 3.92 130
660 chr3L 2867710 2870440 2731 * 660 8.944176e-13 2.87 131
743 chr3L 9050689 9058512 7824 * 743 8.944176e-13 2.67 132
775 chr3L 10860495 10867083 6589 * 775 8.944176e-13 3.53 133
1028 chr3R 5091396 5096951 5556 * 1028 8.944176e-13 3.18 134
1272 chr3R 23825198 23829928 4731 * 1272 8.944176e-13 2.80 135
1303 chr3R 25181250 25188986 7737 * 1303 8.944176e-13 2.12 136
1313 chr3R 26009016 26011155 2140 * 1313 8.944176e-13 3.96 137
1424 chr4 700782 705845 5064 * 1424 8.944176e-13 2.59 138
1474 chrX 2317569 2323527 5959 * 1474 8.944176e-13 3.71 139
56 chr2L 2891229 2899431 8203 * 56 1.742875e-12 3.26 140
90 chr2L 6084343 6090290 5948 * 90 1.742875e-12 3.61 141
621 chr3L 638592 641977 3386 * 621 1.742875e-12 3.52 142
764 chr3L 10410103 10414426 4324 * 764 1.742875e-12 3.16 143
773 chr3L 10841824 10847656 5833 * 773 1.742875e-12 3.34 144
1163 chr3R 16049256 16052622 3367 * 1163 1.742875e-12 2.56 145
1387 chr3R 31605349 31610901 5553 * 1387 1.742875e-12 4.75 146
1539 chrX 7094210 7097949 3740 * 1539 1.742875e-12 4.03 147
93 chr2L 6201316 6206117 4802 * 93 3.065236e-12 3.29 148
47 chr2L 2575859 2578679 2821 * 47 3.115847e-12 2.65 149
999 chr3R 247725 251315 3591 * 999 3.115847e-12 2.45 150
1436 chrX 526372 527770 1399 * 1436 3.115847e-12 2.22 151
315 chr2R 7168961 7176216 7256 * 315 1.002783e-11 3.04 152
319 chr2R 7486118 7491241 5124 * 319 1.002783e-11 3.55 153
823 chr3L 14098836 14103609 4774 * 823 1.002783e-11 3.29 154
883 chr3L 18060522 18069091 8570 * 883 1.002783e-11 3.55 155
1248 chr3R 21855788 21860459 4672 * 1248 1.002783e-11 2.81 156
1340 chr3R 29062895 29072488 9594 * 1340 1.002783e-11 3.27 157
1644 chrX 15669195 15671962 2768 * 1644 1.002783e-11 3.23 158
451 chr2R 15357499 15364302 6804 * 451 1.146944e-11 2.46 159
478 chr2R 17220522 17226866 6345 * 478 1.146944e-11 3.18 160
499 chr2R 18336511 18346369 9859 * 499 1.146944e-11 3.26 161
1120 chr3R 11757705 11765270 7566 * 1120 1.146944e-11 3.64 162
1168 chr3R 16234168 16237877 3710 * 1168 1.146944e-11 3.25 163
1223 chr3R 20780396 20788565 8170 * 1223 1.146944e-11 4.57 164
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1404 chr4 69380 72515 3136 * 1404 6.643851e-07 2.50 441
1631 chrX 14210727 14213833 3107 * 1631 6.643851e-07 2.53 442
1638 chrX 15018924 15022029 3106 * 1638 6.643851e-07 1.83 443
1647 chrX 15689252 15691446 2195 * 1647 6.643851e-07 1.74 444
1698 chrX 19782809 19784208 1400 * 1698 6.643851e-07 2.36 445
2 chr2L 71492 76602 5111 * 2 1.013708e-06 3.11 446
70 chr2L 4115806 4120961 5156 * 70 1.013708e-06 2.25 447
79 chr2L 5292103 5294424 2322 * 79 1.013708e-06 3.83 448
87 chr2L 5997096 5999495 2400 * 87 1.013708e-06 2.61 449
96 chr2L 6539255 6542341 3087 * 96 1.013708e-06 2.34 450
125 chr2L 8602087 8606415 4329 * 125 1.013708e-06 2.52 451
136 chr2L 8843472 8846582 3111 * 136 1.013708e-06 2.51 452
190 chr2L 14570075 14573196 3122 * 190 1.013708e-06 1.99 453
215 chr2L 16824454 16826238 1785 * 215 1.013708e-06 2.60 454
219 chr2L 17537449 17540542 3094 * 219 1.013708e-06 1.81 455
243 chr2L 19193145 19198210 5066 * 243 1.013708e-06 2.38 456
262 chr2L 20758160 20761347 3188 * 262 1.013708e-06 1.82 457
361 chr2R 10268973 10272404 3432 * 361 1.013708e-06 1.98 458
363 chr2R 10537287 10538217 931 * 363 1.013708e-06 1.77 459
366 chr2R 10553485 10555991 2507 * 366 1.013708e-06 2.73 460
389 chr2R 11990647 11993278 2632 * 389 1.013708e-06 3.04 461
422 chr2R 13702247 13705605 3359 * 422 1.013708e-06 2.20 462
450 chr2R 15351642 15354740 3099 * 450 1.013708e-06 2.56 463
461 chr2R 16148514 16151663 3150 * 461 1.013708e-06 2.83 464
501 chr2R 18438149 18441654 3506 * 501 1.013708e-06 2.91 465
589 chr2R 24962551 24965949 3399 * 589 1.013708e-06 2.49 466
598 chr3L 69047 74277 5231 * 598 1.013708e-06 2.57 467
603 chr3L 152321 155968 3648 * 603 1.013708e-06 2.39 468
616 chr3L 536916 541136 4221 * 616 1.013708e-06 2.61 469
783 chr3L 11419746 11423934 4189 * 783 1.013708e-06 2.84 470
864 chr3L 16602270 16603834 1565 * 864 1.013708e-06 2.83 471
893 chr3L 18409953 18414177 4225 * 893 1.013708e-06 1.86 472
907 chr3L 19667843 19674271 6429 * 907 1.013708e-06 1.93 473
913 chr3L 20185593 20189630 4038 * 913 1.013708e-06 1.73 474
927 chr3L 20791500 20794298 2799 * 927 1.013708e-06 3.12 475
939 chr3L 21588991 21591609 2619 * 939 1.013708e-06 1.61 476
953 chr3L 22235991 22240058 4068 * 953 1.013708e-06 2.79 477
958 chr3L 22355596 22359892 4297 * 958 1.013708e-06 3.27 478
962 chr3L 22430375 22432579 2205 * 962 1.013708e-06 1.97 479
969 chr3L 22833659 22837164 3506 * 969 1.013708e-06 3.07 480
1022 chr3R 4983032 4987047 4016 * 1022 1.013708e-06 1.81 481
1098 chr3R 10568805 10571705 2901 * 1098 1.013708e-06 2.23 482
1140 chr3R 13683110 13687522 4413 * 1140 1.013708e-06 3.68 483
1158 chr3R 15577978 15581817 3840 * 1158 1.013708e-06 1.94 484
1182 chr3R 17550131 17552271 2141 * 1182 1.013708e-06 2.07 485
1225 chr3R 20828711 20831139 2429 * 1225 1.013708e-06 1.96 486
1273 chr3R 23884548 23889118 4571 * 1273 1.013708e-06 2.44 487
1336 chr3R 28570580 28574665 4086 * 1336 1.013708e-06 3.05 488
1362 chr3R 30216592 30220274 3683 * 1362 1.013708e-06 2.58 489
1369 chr3R 30386390 30389750 3361 * 1369 1.013708e-06 3.03 490
1372 chr3R 30465843 30468806 2964 * 1372 1.013708e-06 1.56 491
1452 chrX 1379226 1382305 3080 * 1452 1.013708e-06 2.27 492
1495 chrX 3542269 3546561 4293 * 1495 1.013708e-06 1.99 493
1497 chrX 3675495 3682254 6760 * 1497 1.013708e-06 1.93 494
1522 chrX 5894309 5898235 3927 * 1522 1.013708e-06 2.36 495
1554 chrX 7713560 7717549 3990 * 1554 1.013708e-06 3.94 496
1609 chrX 12099555 12102543 2989 * 1609 1.013708e-06 2.71 497
1626 chrX 13228027 13229702 1676 * 1626 1.013708e-06 1.80 498
1630 chrX 13785122 13790344 5223 * 1630 1.013708e-06 3.07 499
1646 chrX 15674954 15676794 1841 * 1646 1.013708e-06 2.73 500
1649 chrX 15709274 15711148 1875 * 1649 1.013708e-06 2.78 501
1661 chrX 16318210 16320639 2430 * 1661 1.013708e-06 3.78 502
1386 chr3R 31420670 31422130 1461 * 1386 1.756567e-06 2.35 503
23 chr2L 1254528 1258666 4139 * 23 2.002850e-06 3.30 504
32 chr2L 1644524 1648164 3641 * 32 2.002850e-06 2.22 505
64 chr2L 3803662 3807064 3403 * 64 2.002850e-06 2.83 506
95 chr2L 6241754 6243879 2126 * 95 2.002850e-06 2.77 507
121 chr2L 8423467 8426897 3431 * 121 2.002850e-06 2.92 508
123 chr2L 8554438 8557793 3356 * 123 2.002850e-06 2.20 509
158 chr2L 10268865 10270382 1518 * 158 2.002850e-06 2.65 510
161 chr2L 10546619 10551302 4684 * 161 2.002850e-06 3.54 511
321 chr2R 7779559 7781669 2111 * 321 2.002850e-06 3.03 512
330 chr2R 8181475 8183566 2092 * 330 2.002850e-06 2.99 513
396 chr2R 12551404 12555413 4010 * 396 2.002850e-06 2.40 514
423 chr2R 13720072 13725839 5768 * 423 2.002850e-06 2.34 515
432 chr2R 13999897 14004257 4361 * 432 2.002850e-06 2.25 516
490 chr2R 17716419 17720079 3661 * 490 2.002850e-06 2.59 517
569 chr2R 23743802 23746299 2498 * 569 2.002850e-06 2.35 518
580 chr2R 24062357 24064804 2448 * 580 2.002850e-06 3.05 519
664 chr3L 3071918 3074613 2696 * 664 2.002850e-06 2.51 520
751 chr3L 9693129 9697272 4144 * 751 2.002850e-06 2.86 521
926 chr3L 20784080 20786707 2628 * 926 2.002850e-06 3.04 522
964 chr3L 22537229 22538562 1334 * 964 2.002850e-06 1.84 523
1017 chr3R 4855829 4856453 625 * 1017 2.002850e-06 1.94 524
1128 chr3R 12326543 12333104 6562 * 1128 2.002850e-06 3.00 525
1205 chr3R 18912485 18915356 2872 * 1205 2.002850e-06 2.25 526
1215 chr3R 19494625 19499183 4559 * 1215 2.002850e-06 2.51 527
1238 chr3R 21533834 21536407 2574 * 1238 2.002850e-06 3.07 528
1283 chr3R 24262754 24265732 2979 * 1283 2.002850e-06 2.83 529
1284 chr3R 24269072 24271007 1936 * 1284 2.002850e-06 1.80 530
1294 chr3R 24811575 24814706 3132 * 1294 2.002850e-06 3.92 531
1317 chr3R 26034206 26037688 3483 * 1317 2.002850e-06 3.02 532
1342 chr3R 29111580 29113634 2055 * 1342 2.002850e-06 2.83 533
1451 chrX 1232323 1234692 2370 * 1451 2.002850e-06 3.25 534
1455 chrX 1548591 1552658 4068 * 1455 2.002850e-06 2.22 535
1523 chrX 5900206 5902953 2748 * 1523 2.002850e-06 2.55 536
715 chr3L 6746687 6748159 1473 * 715 3.804174e-06 2.20 537
996 chr3R 231131 233730 2600 * 996 3.804174e-06 2.70 538
1696 chrX 19735017 19737158 2142 * 1696 3.804174e-06 1.63 539
1724 chrX 23282634 23284832 2199 * 1724 3.804174e-06 2.82 540
184 chr2L 13891348 13895468 4121 * 184 4.337679e-06 2.90 541
292 chr2R 6119651 6122684 3034 * 292 4.337679e-06 4.16 542
320 chr2R 7616927 7621536 4610 * 320 4.337679e-06 3.45 543
367 chr2R 10568333 10570565 2233 * 367 4.337679e-06 2.52 544
387 chr2R 11716221 11718817 2597 * 387 4.337679e-06 2.90 545
391 chr2R 12140000 12141482 1483 * 391 4.337679e-06 2.34 546
457 chr2R 15912877 15914402 1526 * 457 4.337679e-06 3.25 547
467 chr2R 16451898 16454186 2289 * 467 4.337679e-06 3.26 548
541 chr2R 21706563 21708985 2423 * 541 4.337679e-06 2.57 549
590 chr2R 25009853 25011754 1902 * 590 4.337679e-06 3.38 550
656 chr3L 2598654 2599898 1245 * 656 4.337679e-06 3.35 551
718 chr3L 6885156 6887751 2596 * 718 4.337679e-06 2.54 552
798 chr3L 12575414 12577686 2273 * 798 4.337679e-06 3.13 553
843 chr3L 15534372 15536743 2372 * 843 4.337679e-06 2.75 554
888 chr3L 18271013 18276347 5335 * 888 4.337679e-06 3.70 555
905 chr3L 19618378 19619408 1031 * 905 4.337679e-06 3.54 556
930 chr3L 21044163 21045799 1637 * 930 4.337679e-06 3.42 557
1025 chr3R 4993940 4998592 4653 * 1025 4.337679e-06 3.15 558
1083 chr3R 9561762 9564158 2397 * 1083 4.337679e-06 3.23 559
1085 chr3R 9702186 9706481 4296 * 1085 4.337679e-06 3.65 560
1490 chrX 3370695 3375088 4394 * 1490 4.337679e-06 2.80 561
1538 chrX 6997049 6999033 1985 * 1538 4.337679e-06 3.79 562
1633 chrX 14265998 14267565 1568 * 1633 4.337679e-06 3.49 563
99 chr2L 6791645 6793325 1681 * 99 5.116864e-06 1.44 564
579 chr2R 24044664 24047824 3161 * 579 5.116864e-06 1.58 565
644 chr3L 1501284 1502716 1433 * 644 5.116864e-06 1.38 566
976 chr3L 23116856 23117709 854 * 976 5.116864e-06 1.55 567
1089 chr3R 10225918 10227246 1329 * 1089 5.116864e-06 1.74 568
1258 chr3R 22338689 22341333 2645 * 1258 5.116864e-06 2.09 569
1318 chr3R 26037954 26041468 3515 * 1318 5.116864e-06 2.50 570
1456 chrX 1616288 1618036 1749 * 1456 5.116864e-06 1.33 571
1628 chrX 13743913 13746309 2397 * 1628 5.116864e-06 1.44 572
1726 chrX 23391596 23392332 737 * 1726 5.116864e-06 2.07 573
1728 chrX 23430552 23432254 1703 * 1728 5.116864e-06 2.65 574
855 chr3L 16049280 16051414 2135 * 855 5.802324e-06 2.21 575
875 chr3L 17358172 17359958 1787 * 875 5.802324e-06 2.02 576
1527 chrX 6281718 6282492 775 * 1527 5.802324e-06 3.01 577
578 chr2R 23977692 23980625 2934 * 578 6.308536e-06 1.92 578
1488 chrX 3158957 3163438 4482 * 1488 6.308536e-06 1.56 579
1602 chrX 11713206 11715986 2781 * 1602 6.308536e-06 1.39 580
170 chr2L 12043572 12046814 3243 * 170 9.079914e-06 3.17 581
203 chr2L 15490426 15494812 4387 * 203 9.079914e-06 3.20 582
238 chr2L 19089274 19091785 2512 * 238 9.079914e-06 2.30 583
274 chr2L 21631752 21634422 2671 * 274 9.079914e-06 2.84 584
298 chr2R 6549106 6553960 4855 * 298 9.079914e-06 3.29 585
323 chr2R 7988057 7990104 2048 * 323 9.079914e-06 1.88 586
333 chr2R 8240123 8241977 1855 * 333 9.079914e-06 1.86 587
339 chr2R 8647400 8650537 3138 * 339 9.079914e-06 2.54 588
421 chr2R 13675917 13680717 4801 * 421 9.079914e-06 2.26 589
485 chr2R 17474368 17475950 1583 * 485 9.079914e-06 2.14 590
503 chr2R 18671042 18674548 3507 * 503 9.079914e-06 2.13 591
523 chr2R 20858954 20861327 2374 * 523 9.079914e-06 2.67 592
526 chr2R 20928514 20932546 4033 * 526 9.079914e-06 2.05 593
562 chr2R 23334636 23338629 3994 * 562 9.079914e-06 2.71 594
639 chr3L 1103495 1105459 1965 * 639 9.079914e-06 1.92 595
642 chr3L 1359709 1360458 750 * 642 9.079914e-06 1.66 596
669 chr3L 3240918 3242211 1294 * 669 9.079914e-06 2.65 597
696 chr3L 5655487 5659857 4371 * 696 9.079914e-06 2.72 598
704 chr3L 5985999 5989389 3391 * 704 9.079914e-06 2.77 599
711 chr3L 6191005 6194307 3303 * 711 9.079914e-06 2.47 600
725 chr3L 7367838 7371717 3880 * 725 9.079914e-06 3.84 601
746 chr3L 9382475 9384720 2246 * 746 9.079914e-06 3.13 602
759 chr3L 10290131 10294668 4538 * 759 9.079914e-06 1.81 603
787 chr3L 11992700 11993972 1273 * 787 9.079914e-06 2.27 604
795 chr3L 12389136 12392914 3779 * 795 9.079914e-06 2.52 605
803 chr3L 12725748 12730870 5123 * 803 9.079914e-06 3.41 606
873 chr3L 17010293 17012390 2098 * 873 9.079914e-06 1.98 607
931 chr3L 21130953 21132627 1675 * 931 9.079914e-06 2.80 608
948 chr3L 22086680 22088809 2130 * 948 9.079914e-06 2.50 609
974 chr3L 22947357 22949983 2627 * 974 9.079914e-06 2.96 610
1016 chr3R 4849951 4853405 3455 * 1016 9.079914e-06 2.14 611
1018 chr3R 4858161 4860042 1882 * 1018 9.079914e-06 2.06 612
1066 chr3R 8809834 8813063 3230 * 1066 9.079914e-06 2.89 613
1147 chr3R 14374353 14380397 6045 * 1147 9.079914e-06 2.69 614
1263 chr3R 22716630 22720386 3757 * 1263 9.079914e-06 2.55 615
1295 chr3R 24866366 24869236 2871 * 1295 9.079914e-06 1.69 616
1309 chr3R 25994841 25997503 2663 * 1309 9.079914e-06 4.13 617
1311 chr3R 25999191 26000061 871 * 1311 9.079914e-06 3.53 618
1410 chr4 404063 408637 4575 * 1410 9.079914e-06 2.16 619
1428 chr4 986410 989945 3536 * 1428 9.079914e-06 2.32 620
1443 chrX 685205 688043 2839 * 1443 9.079914e-06 2.69 621
1460 chrX 1789547 1791337 1791 * 1460 9.079914e-06 1.69 622
1519 chrX 5745772 5747953 2182 * 1519 9.079914e-06 1.84 623
1530 chrX 6599282 6602026 2745 * 1530 9.079914e-06 2.08 624
1588 chrX 10613803 10616660 2858 * 1588 9.079914e-06 2.38 625
1596 chrX 11135837 11138221 2385 * 1596 9.079914e-06 2.69 626
1668 chrX 17123962 17126244 2283 * 1668 9.079914e-06 2.45 627
1705 chrX 20498389 20502478 4090 * 1705 9.079914e-06 2.51 628
1706 chrX 20642929 20644813 1885 * 1706 9.079914e-06 1.99 629
3 chr2L 93377 95662 2286 * 3 1.329893e-05 2.42 630
4 chr2L 107819 110289 2471 * 4 1.329893e-05 1.41 631
15 chr2L 825706 828586 2881 * 15 1.329893e-05 1.69 632
21 chr2L 1243873 1249063 5191 * 21 1.329893e-05 2.67 633
27 chr2L 1428972 1431908 2937 * 27 1.329893e-05 1.54 634
42 chr2L 2362835 2365827 2993 * 42 1.329893e-05 2.00 635
48 chr2L 2634839 2639438 4600 * 48 1.329893e-05 2.74 636
69 chr2L 3975399 3981290 5892 * 69 1.329893e-05 2.27 637
74 chr2L 4349773 4352901 3129 * 74 1.329893e-05 2.67 638
106 chr2L 7420368 7421525 1158 * 106 1.329893e-05 1.80 639
110 chr2L 7591133 7594199 3067 * 110 1.329893e-05 3.99 640
118 chr2L 8382020 8383530 1511 * 118 1.329893e-05 2.03 641
126 chr2L 8611430 8614386 2957 * 126 1.329893e-05 2.17 642
127 chr2L 8749162 8752946 3785 * 127 1.329893e-05 2.69 643
131 chr2L 8798963 8803611 4649 * 131 1.329893e-05 1.72 644
135 chr2L 8836512 8840681 4170 * 135 1.329893e-05 2.20 645
137 chr2L 8868497 8870943 2447 * 137 1.329893e-05 3.01 646
143 chr2L 9337045 9338146 1102 * 143 1.329893e-05 2.62 647
162 chr2L 10568153 10571398 3246 * 162 1.329893e-05 1.99 648
169 chr2L 12009539 12014496 4958 * 169 1.329893e-05 3.38 649
177 chr2L 13614579 13619035 4457 * 177 1.329893e-05 2.87 650
201 chr2L 15478177 15478960 784 * 201 1.329893e-05 1.66 651
205 chr2L 15732317 15734748 2432 * 205 1.329893e-05 2.45 652
214 chr2L 16676058 16677938 1881 * 214 1.329893e-05 1.94 653
232 chr2L 18890722 18892562 1841 * 232 1.329893e-05 2.37 654
270 chr2L 21177357 21180416 3060 * 270 1.329893e-05 2.06 655
275 chr2L 21747837 21751265 3429 * 275 1.329893e-05 2.59 656
289 chr2R 5818002 5822805 4804 * 289 1.329893e-05 2.07 657
296 chr2R 6219094 6222955 3862 * 296 1.329893e-05 1.33 658
299 chr2R 6557908 6561673 3766 * 299 1.329893e-05 1.92 659
304 chr2R 6609530 6614167 4638 * 304 1.329893e-05 1.78 660
313 chr2R 7074131 7078486 4356 * 313 1.329893e-05 1.98 661
331 chr2R 8232329 8233629 1301 * 331 1.329893e-05 2.59 662
337 chr2R 8599846 8602314 2469 * 337 1.329893e-05 1.58 663
341 chr2R 8665530 8670184 4655 * 341 1.329893e-05 3.09 664
382 chr2R 11596060 11604233 8174 * 382 1.329893e-05 2.91 665
388 chr2R 11984102 11986429 2328 * 388 1.329893e-05 3.22 666
400 chr2R 12685701 12686810 1110 * 400 1.329893e-05 1.78 667
402 chr2R 12703410 12705809 2400 * 402 1.329893e-05 3.10 668
414 chr2R 13223020 13225763 2744 * 414 1.329893e-05 1.67 669
473 chr2R 17020618 17021647 1030 * 473 1.329893e-05 1.93 670
481 chr2R 17342264 17347892 5629 * 481 1.329893e-05 1.75 671
506 chr2R 19394488 19396527 2040 * 506 1.329893e-05 2.67 672
545 chr2R 22285875 22288146 2272 * 545 1.329893e-05 1.50 673
572 chr2R 23870411 23871614 1204 * 572 1.329893e-05 2.11 674
614 chr3L 421117 427565 6449 * 614 1.329893e-05 2.65 675
630 chr3L 782404 783545 1142 * 630 1.329893e-05 2.21 676
638 chr3L 1075884 1080259 4376 * 638 1.329893e-05 3.03 677
645 chr3L 1515169 1517825 2657 * 645 1.329893e-05 3.15 678
652 chr3L 2386704 2388620 1917 * 652 1.329893e-05 3.52 679
684 chr3L 4158965 4160461 1497 * 684 1.329893e-05 2.67 680
694 chr3L 5184697 5188386 3690 * 694 1.329893e-05 1.64 681
706 chr3L 6075219 6079346 4128 * 706 1.329893e-05 2.64 682
754 chr3L 9853001 9855955 2955 * 754 1.329893e-05 1.78 683
765 chr3L 10423880 10425963 2084 * 765 1.329893e-05 2.53 684
771 chr3L 10823985 10828414 4430 * 771 1.329893e-05 2.48 685
789 chr3L 12150192 12151468 1277 * 789 1.329893e-05 3.09 686
809 chr3L 13189693 13191570 1878 * 809 1.329893e-05 1.62 687
861 chr3L 16407037 16411922 4886 * 861 1.329893e-05 3.05 688
901 chr3L 19044033 19046341 2309 * 901 1.329893e-05 3.06 689
909 chr3L 19894923 19897500 2578 * 909 1.329893e-05 1.96 690
915 chr3L 20284036 20289614 5579 * 915 1.329893e-05 1.89 691
924 chr3L 20516123 20519737 3615 * 924 1.329893e-05 2.97 692
955 chr3L 22266610 22269813 3204 * 955 1.329893e-05 3.15 693
966 chr3L 22597243 22600571 3329 * 966 1.329893e-05 1.92 694
971 chr3L 22844870 22849228 4359 * 971 1.329893e-05 1.99 695
1008 chr3R 4280971 4285606 4636 * 1008 1.329893e-05 1.50 696
1024 chr3R 4988711 4990909 2199 * 1024 1.329893e-05 1.58 697
1029 chr3R 5098161 5100501 2341 * 1029 1.329893e-05 1.52 698
1031 chr3R 5103443 5104677 1235 * 1031 1.329893e-05 1.67 699
1063 chr3R 8738350 8740975 2626 * 1063 1.329893e-05 1.85 700
1068 chr3R 8886408 8888218 1811 * 1068 1.329893e-05 2.54 701
1096 chr3R 10503897 10506694 2798 * 1096 1.329893e-05 1.55 702
1106 chr3R 11277694 11280584 2891 * 1106 1.329893e-05 2.07 703
1107 chr3R 11284132 11287408 3277 * 1107 1.329893e-05 1.53 704
1110 chr3R 11300423 11304475 4053 * 1110 1.329893e-05 1.87 705
1126 chr3R 12276961 12279822 2862 * 1126 1.329893e-05 1.67 706
1144 chr3R 14308128 14309298 1171 * 1144 1.329893e-05 1.63 707
1146 chr3R 14345679 14352752 7074 * 1146 1.329893e-05 1.99 708
1189 chr3R 17811073 17814373 3301 * 1189 1.329893e-05 2.60 709
1202 chr3R 18705781 18708741 2961 * 1202 1.329893e-05 2.37 710
1203 chr3R 18718958 18723811 4854 * 1203 1.329893e-05 2.18 711
1253 chr3R 22159905 22164829 4925 * 1253 1.329893e-05 2.36 712
1254 chr3R 22203145 22207307 4163 * 1254 1.329893e-05 2.31 713
1287 chr3R 24495776 24498374 2599 * 1287 1.329893e-05 2.07 714
1322 chr3R 26851654 26855626 3973 * 1322 1.329893e-05 1.96 715
1381 chr3R 30857946 30861592 3647 * 1381 1.329893e-05 2.01 716
1389 chr3R 31683398 31684204 807 * 1389 1.329893e-05 2.04 717
1398 chr3R 31947942 31952109 4168 * 1398 1.329893e-05 2.81 718
1399 chr3R 32011826 32014216 2391 * 1399 1.329893e-05 2.76 719
1408 chr4 376121 377531 1411 * 1408 1.329893e-05 1.60 720
1420 chr4 606244 607913 1670 * 1420 1.329893e-05 2.25 721
1445 chrX 835141 837016 1876 * 1445 1.329893e-05 1.63 722
1448 chrX 883016 886459 3444 * 1448 1.329893e-05 1.92 723
1454 chrX 1523467 1526891 3425 * 1454 1.329893e-05 2.06 724
1469 chrX 2122037 2124882 2846 * 1469 1.329893e-05 3.78 725
1476 chrX 2351907 2353172 1266 * 1476 1.329893e-05 2.23 726
1481 chrX 2412322 2413997 1676 * 1481 1.329893e-05 2.09 727
1496 chrX 3673406 3675490 2085 * 1496 1.329893e-05 1.92 728
1512 chrX 5139672 5148457 8786 * 1512 1.329893e-05 1.80 729
1524 chrX 5994687 5997188 2502 * 1524 1.329893e-05 2.60 730
1534 chrX 6868020 6869924 1905 * 1534 1.329893e-05 1.63 731
1571 chrX 8893402 8895207 1806 * 1571 1.329893e-05 2.49 732
1572 chrX 9128676 9131708 3033 * 1572 1.329893e-05 2.54 733
1606 chrX 12006983 12008583 1601 * 1606 1.329893e-05 1.74 734
1607 chrX 12076960 12079823 2864 * 1607 1.329893e-05 2.24 735
1617 chrX 12659453 12663564 4112 * 1617 1.329893e-05 1.65 736
1654 chrX 15820908 15823810 2903 * 1654 1.329893e-05 2.32 737
1691 chrX 19494787 19497983 3197 * 1691 1.329893e-05 2.54 738
1707 chrX 20665055 20668464 3410 * 1707 1.329893e-05 1.76 739
1711 chrX 20726821 20731259 4439 * 1711 1.329893e-05 1.75 740
33 chr2L 1649740 1653409 3670 * 33 3.124258e-05 3.23 741
369 chr2R 10680494 10684510 4017 * 369 3.124258e-05 3.27 742
460 chr2R 16029643 16033135 3493 * 460 3.124258e-05 3.36 743
509 chr2R 19448736 19452013 3278 * 509 3.124258e-05 3.78 744
627 chr3L 744966 746371 1406 * 627 3.124258e-05 3.62 745
641 chr3L 1334379 1336081 1703 * 641 3.124258e-05 2.90 746
713 chr3L 6487350 6489123 1774 * 713 3.124258e-05 3.48 747
735 chr3L 8238533 8240188 1656 * 735 3.124258e-05 3.05 748
952 chr3L 22209430 22210457 1028 * 952 3.124258e-05 2.96 749
1010 chr3R 4649254 4650835 1582 * 1010 3.124258e-05 3.60 750
1160 chr3R 15792421 15794353 1933 * 1160 3.124258e-05 3.74 751
1211 chr3R 19092319 19094503 2185 * 1211 3.124258e-05 3.57 752
1222 chr3R 20777967 20779866 1900 * 1222 3.124258e-05 4.09 753
1244 chr3R 21639644 21640787 1144 * 1244 3.124258e-05 3.33 754
1355 chr3R 29773655 29775929 2275 * 1355 3.124258e-05 3.80 755
1417 chr4 501269 503462 2194 * 1417 3.124258e-05 3.18 756
35 chr2L 1687119 1688981 1863 * 35 4.580481e-05 2.48 757
100 chr2L 6841746 6845114 3369 * 100 4.580481e-05 1.89 758
109 chr2L 7505518 7507832 2315 * 109 4.580481e-05 2.09 759
111 chr2L 7637234 7639067 1834 * 111 4.580481e-05 2.75 760
116 chr2L 8301894 8303815 1922 * 116 4.580481e-05 2.98 761
207 chr2L 15744750 15747460 2711 * 207 4.580481e-05 2.40 762
213 chr2L 16586732 16589311 2580 * 213 4.580481e-05 3.10 763
244 chr2L 19221727 19224075 2349 * 244 4.580481e-05 2.19 764
293 chr2R 6124684 6127846 3163 * 293 4.580481e-05 2.96 765
329 chr2R 8173763 8176018 2256 * 329 4.580481e-05 2.72 766
437 chr2R 14486847 14488666 1820 * 437 4.580481e-05 2.57 767
466 chr2R 16392380 16396897 4518 * 466 4.580481e-05 1.85 768
599 chr3L 85780 88178 2399 * 599 4.580481e-05 2.37 769
703 chr3L 5978444 5980809 2366 * 703 4.580481e-05 2.04 770
729 chr3L 7953269 7955159 1891 * 729 4.580481e-05 2.95 771
732 chr3L 8128140 8129251 1112 * 732 4.580481e-05 2.13 772
925 chr3L 20520339 20521339 1001 * 925 4.580481e-05 3.02 773
1015 chr3R 4834437 4836874 2438 * 1015 4.580481e-05 2.63 774
1019 chr3R 4910295 4913353 3059 * 1019 4.580481e-05 2.71 775
1027 chr3R 5085499 5089266 3768 * 1027 4.580481e-05 2.44 776
1050 chr3R 6415849 6424112 8264 * 1050 4.580481e-05 2.82 777
1053 chr3R 7088417 7091466 3050 * 1053 4.580481e-05 2.60 778
1116 chr3R 11614008 11614612 605 * 1116 4.580481e-05 2.73 779
1195 chr3R 18201635 18203464 1830 * 1195 4.580481e-05 2.73 780
1217 chr3R 19929796 19932123 2328 * 1217 4.580481e-05 3.21 781
1246 chr3R 21827818 21828948 1131 * 1246 4.580481e-05 2.62 782
1262 chr3R 22674698 22677125 2428 * 1262 4.580481e-05 2.72 783
1364 chr3R 30233461 30237293 3833 * 1364 4.580481e-05 3.42 784
1440 chrX 635623 637686 2064 * 1440 4.580481e-05 2.57 785
1504 chrX 4019810 4022180 2371 * 1504 4.580481e-05 2.71 786
1586 chrX 10512037 10515033 2997 * 1586 4.580481e-05 2.39 787
1619 chrX 12718583 12722314 3732 * 1619 4.580481e-05 2.57 788
1632 chrX 14216955 14219745 2791 * 1632 4.580481e-05 3.18 789
1640 chrX 15474621 15476025 1405 * 1640 4.580481e-05 2.77 790
1662 chrX 16329698 16336262 6565 * 1662 4.580481e-05 2.44 791
1686 chrX 19259907 19261171 1265 * 1686 4.580481e-05 2.12 792
117 chr2L 8360804 8367726 6923 * 117 6.964987e-05 1.82 793
538 chr2R 21501324 21503385 2062 * 538 6.964987e-05 1.77 794
564 chr2R 23551453 23553092 1640 * 564 6.964987e-05 2.77 795
1080 chr3R 9416738 9420487 3750 * 1080 6.964987e-05 2.47 796
575 chr2R 23909583 23913210 3628 * 575 7.008412e-05 2.50 797
741 chr3L 8645093 8647143 2051 * 741 7.008412e-05 1.25 798
936 chr3L 21433322 21435667 2346 * 936 7.008412e-05 1.34 799
1337 chr3R 28599157 28603442 4286 * 1337 7.008412e-05 1.46 800
1403 chr3R 32074885 32076655 1771 * 1403 7.008412e-05 1.46 801
1544 chrX 7235989 7236845 857 * 1544 7.008412e-05 1.91 802
1562 chrX 8242662 8244093 1432 * 1562 7.008412e-05 2.17 803
1595 chrX 10829594 10830067 474 * 1595 7.008412e-05 1.33 804
917 chr3L 20310350 20310974 625 * 917 7.162437e-05 3.14 805
954 chr3L 22261926 22263124 1199 * 954 7.162437e-05 3.27 806
989 chr3R 33015 86734 53720 * 989 7.162437e-05 3.28 807
1723 chrX 23262339 23262881 543 * 1723 7.162437e-05 2.78 808
22 chr2L 1250769 1253061 2293 * 22 9.741308e-05 1.84 809
148 chr2L 9585006 9586976 1971 * 148 9.741308e-05 1.68 810
152 chr2L 9791148 9792003 856 * 152 9.741308e-05 1.67 811
272 chr2L 21309417 21311981 2565 * 272 9.741308e-05 2.05 812
629 chr3L 775791 778097 2307 * 629 9.741308e-05 1.51 813
779 chr3L 11210080 11211637 1558 * 779 9.741308e-05 2.39 814
818 chr3L 13841992 13844106 2115 * 818 9.741308e-05 1.98 815
910 chr3L 19897537 19899770 2234 * 910 9.741308e-05 1.88 816
980 chr3L 25130467 25131494 1028 * 980 9.741308e-05 1.86 817
1030 chr3R 5100604 5103161 2558 * 1030 9.741308e-05 1.34 818
1094 chr3R 10451396 10453533 2138 * 1094 9.741308e-05 1.26 819
1100 chr3R 10760655 10761781 1127 * 1100 9.741308e-05 1.25 820
1148 chr3R 14616608 14618220 1613 * 1148 9.741308e-05 1.74 821
1232 chr3R 21340691 21342539 1849 * 1232 9.741308e-05 2.14 822
1259 chr3R 22468125 22470811 2687 * 1259 9.741308e-05 2.31 823
1682 chrX 18645667 18647275 1609 * 1682 9.741308e-05 2.18 824
1729 chrX 23456620 23456906 287 * 1729 9.741308e-05 2.42 825
55 chr2L 2887736 2890648 2913 * 55 1.438142e-04 2.57 826
65 chr2L 3817606 3819523 1918 * 65 1.438142e-04 2.71 827
75 chr2L 4370563 4372130 1568 * 75 1.438142e-04 2.45 828
80 chr2L 5305530 5307436 1907 * 80 1.438142e-04 3.67 829
114 chr2L 7991780 7994122 2343 * 114 1.438142e-04 2.63 830
122 chr2L 8516984 8518726 1743 * 122 1.438142e-04 3.93 831
124 chr2L 8582542 8586086 3545 * 124 1.438142e-04 2.54 832
180 chr2L 13850380 13852470 2091 * 180 1.438142e-04 4.11 833
185 chr2L 14023021 14026623 3603 * 185 1.438142e-04 4.13 834
202 chr2L 15481125 15483604 2480 * 202 1.438142e-04 3.30 835
208 chr2L 15781164 15784349 3186 * 208 1.438142e-04 2.63 836
288 chr2R 5740205 5744016 3812 * 288 1.438142e-04 2.49 837
351 chr2R 9691504 9693721 2218 * 351 1.438142e-04 2.64 838
368 chr2R 10671295 10675307 4013 * 368 1.438142e-04 2.62 839
393 chr2R 12172690 12174563 1874 * 393 1.438142e-04 2.26 840
405 chr2R 12879000 12880459 1460 * 405 1.438142e-04 2.81 841
438 chr2R 14653525 14655644 2120 * 438 1.438142e-04 2.32 842
458 chr2R 15929987 15932245 2259 * 458 1.438142e-04 2.12 843
471 chr2R 16783257 16785283 2027 * 471 1.438142e-04 3.27 844
513 chr2R 19808131 19811238 3108 * 513 1.438142e-04 2.27 845
514 chr2R 19818769 19822207 3439 * 514 1.438142e-04 2.76 846
552 chr2R 22521345 22524352 3008 * 552 1.438142e-04 2.81 847
602 chr3L 140251 141793 1543 * 602 1.438142e-04 2.53 848
617 chr3L 542835 545216 2382 * 617 1.438142e-04 3.18 849
622 chr3L 648794 650504 1711 * 622 1.438142e-04 2.51 850
671 chr3L 3336420 3337866 1447 * 671 1.438142e-04 3.56 851
742 chr3L 8996708 8997696 989 * 742 1.438142e-04 3.43 852
785 chr3L 11831949 11833052 1104 * 785 1.438142e-04 3.78 853
790 chr3L 12267319 12268152 834 * 790 1.438142e-04 3.30 854
792 chr3L 12287798 12291130 3333 * 792 1.438142e-04 2.62 855
878 chr3L 17763141 17765584 2444 * 878 1.438142e-04 2.66 856
886 chr3L 18105391 18107134 1744 * 886 1.438142e-04 2.41 857
898 chr3L 18800193 18801606 1414 * 898 1.438142e-04 2.40 858
945 chr3L 21862707 21865577 2871 * 945 1.438142e-04 2.18 859
967 chr3L 22689910 22692063 2154 * 967 1.438142e-04 2.20 860
972 chr3L 22850007 22853088 3082 * 972 1.438142e-04 2.68 861
1021 chr3R 4979746 4982492 2747 * 1021 1.438142e-04 2.39 862
1174 chr3R 16587401 16588567 1167 * 1174 1.438142e-04 2.36 863
1183 chr3R 17572739 17575486 2748 * 1183 1.438142e-04 2.52 864
1194 chr3R 18196271 18200251 3981 * 1194 1.438142e-04 3.02 865
1196 chr3R 18234841 18235559 719 * 1196 1.438142e-04 3.35 866
1230 chr3R 21267320 21269470 2151 * 1230 1.438142e-04 3.06 867
1231 chr3R 21287620 21290078 2459 * 1231 1.438142e-04 2.97 868
1286 chr3R 24318079 24320738 2660 * 1286 1.438142e-04 3.43 869
1345 chr3R 29214419 29215760 1342 * 1345 1.438142e-04 3.57 870
1358 chr3R 30025432 30028522 3091 * 1358 1.438142e-04 2.21 871
1396 chr3R 31812065 31813988 1924 * 1396 1.438142e-04 3.31 872
1421 chr4 625657 626524 868 * 1421 1.438142e-04 2.79 873
1482 chrX 2635427 2637604 2178 * 1482 1.438142e-04 2.92 874
1516 chrX 5645996 5647042 1047 * 1516 1.438142e-04 2.29 875
1517 chrX 5661696 5664963 3268 * 1517 1.438142e-04 3.58 876
1537 chrX 6988004 6990167 2164 * 1537 1.438142e-04 2.92 877
1599 chrX 11610301 11611783 1483 * 1599 1.438142e-04 3.34 878
1634 chrX 14320755 14322447 1693 * 1634 1.438142e-04 2.55 879
1657 chrX 15970371 15972416 2046 * 1657 1.438142e-04 2.65 880
1677 chrX 17826738 17827411 674 * 1677 1.438142e-04 2.40 881
1 chr2L 65673 67905 2233 * 1 1.441731e-04 2.16 882
11 chr2L 284480 287193 2714 * 11 1.441731e-04 1.81 883
12 chr2L 412875 415198 2324 * 12 1.441731e-04 2.82 884
19 chr2L 1066996 1069345 2350 * 19 1.441731e-04 1.53 885
62 chr2L 3684331 3686894 2564 * 62 1.441731e-04 1.71 886
73 chr2L 4333042 4336543 3502 * 73 1.441731e-04 2.45 887
108 chr2L 7494524 7496967 2444 * 108 1.441731e-04 2.75 888
173 chr2L 12681619 12683687 2069 * 173 1.441731e-04 2.13 889
195 chr2L 15332498 15334271 1774 * 195 1.441731e-04 2.02 890
198 chr2L 15432673 15433639 967 * 198 1.441731e-04 2.22 891
200 chr2L 15441301 15442917 1617 * 200 1.441731e-04 2.09 892
224 chr2L 17738724 17740957 2234 * 224 1.441731e-04 2.05 893
239 chr2L 19102852 19104881 2030 * 239 1.441731e-04 2.55 894
246 chr2L 19235538 19237118 1581 * 246 1.441731e-04 1.71 895
267 chr2L 21014049 21015835 1787 * 267 1.441731e-04 2.91 896
300 chr2R 6576883 6579939 3057 * 300 1.441731e-04 2.23 897
308 chr2R 6696521 6697763 1243 * 308 1.441731e-04 2.59 898
338 chr2R 8605735 8608540 2806 * 338 1.441731e-04 1.92 899
357 chr2R 10077449 10078680 1232 * 357 1.441731e-04 1.84 900
407 chr2R 12986694 12989722 3029 * 407 1.441731e-04 1.77 901
427 chr2R 13938155 13941917 3763 * 427 1.441731e-04 2.38 902
488 chr2R 17580621 17581847 1227 * 488 1.441731e-04 3.05 903
518 chr2R 20664540 20666406 1867 * 518 1.441731e-04 2.99 904
570 chr2R 23847493 23849420 1928 * 570 1.441731e-04 2.17 905
582 chr2R 24225675 24229232 3558 * 582 1.441731e-04 2.68 906
592 chr2R 25120001 25121818 1818 * 592 1.441731e-04 2.12 907
663 chr3L 3057441 3059341 1901 * 663 1.441731e-04 1.65 908
670 chr3L 3325519 3327249 1731 * 670 1.441731e-04 2.52 909
681 chr3L 4079335 4081938 2604 * 681 1.441731e-04 1.79 910
683 chr3L 4101495 4104381 2887 * 683 1.441731e-04 2.14 911
739 chr3L 8557218 8558396 1179 * 739 1.441731e-04 1.72 912
800 chr3L 12650852 12652374 1523 * 800 1.441731e-04 1.85 913
806 chr3L 13084309 13085791 1483 * 806 1.441731e-04 2.91 914
835 chr3L 14784458 14787097 2640 * 835 1.441731e-04 2.69 915
849 chr3L 15728071 15734413 6343 * 849 1.441731e-04 2.36 916
912 chr3L 20002013 20003583 1571 * 912 1.441731e-04 2.30 917
950 chr3L 22149313 22150948 1636 * 950 1.441731e-04 2.54 918
1036 chr3R 5215317 5217586 2270 * 1036 1.441731e-04 2.64 919
1038 chr3R 5262095 5264348 2254 * 1038 1.441731e-04 2.64 920
1061 chr3R 8669080 8670680 1601 * 1061 1.441731e-04 1.83 921
1112 chr3R 11316079 11318854 2776 * 1112 1.441731e-04 1.88 922
1127 chr3R 12305934 12307474 1541 * 1127 1.441731e-04 1.52 923
1131 chr3R 12448473 12451003 2531 * 1131 1.441731e-04 2.32 924
1137 chr3R 12626474 12628446 1973 * 1137 1.441731e-04 3.02 925
1178 chr3R 17077933 17080194 2262 * 1178 1.441731e-04 1.89 926
1216 chr3R 19647801 19648972 1172 * 1216 1.441731e-04 2.02 927
1247 chr3R 21853550 21855534 1985 * 1247 1.441731e-04 1.71 928
1279 chr3R 24151954 24152868 915 * 1279 1.441731e-04 1.87 929
1288 chr3R 24506600 24508488 1889 * 1288 1.441731e-04 1.89 930
1299 chr3R 25088848 25090605 1758 * 1299 1.441731e-04 1.65 931
1314 chr3R 26011360 26012884 1525 * 1314 1.441731e-04 2.31 932
1323 chr3R 26857335 26861060 3726 * 1323 1.441731e-04 2.36 933
1327 chr3R 27414694 27418876 4183 * 1327 1.441731e-04 2.21 934
1331 chr3R 27608483 27612250 3768 * 1331 1.441731e-04 1.69 935
1333 chr3R 27924968 27926386 1419 * 1333 1.441731e-04 2.84 936
1334 chr3R 28325439 28327589 2151 * 1334 1.441731e-04 1.60 937
1344 chr3R 29152959 29153866 908 * 1344 1.441731e-04 2.47 938
1361 chr3R 30165548 30167237 1690 * 1361 1.441731e-04 2.50 939
1423 chr4 663092 664916 1825 * 1423 1.441731e-04 1.86 940
1518 chrX 5690035 5690446 412 * 1518 1.441731e-04 1.40 941
1557 chrX 7943881 7945949 2069 * 1557 1.441731e-04 2.56 942
1582 chrX 10324185 10326009 1825 * 1582 1.441731e-04 1.75 943
1604 chrX 11791501 11793882 2382 * 1604 1.441731e-04 2.53 944
1625 chrX 12993561 12996157 2597 * 1625 1.441731e-04 2.45 945
1635 chrX 14649077 14651512 2436 * 1635 1.441731e-04 2.66 946
1683 chrX 19000105 19002449 2345 * 1683 1.441731e-04 1.96 947
1692 chrX 19498203 19498826 624 * 1692 1.441731e-04 1.41 948
968 chr3L 22822615 22824319 1705 * 968 2.004433e-04 2.09 949
1082 chr3R 9514968 9516752 1785 * 1082 2.004433e-04 2.97 950
1119 chr3R 11741260 11742281 1022 * 1119 2.004433e-04 2.48 951
1197 chr3R 18243056 18247564 4509 * 1197 2.004433e-04 2.90 952
1531 chrX 6707952 6710510 2559 * 1531 2.004433e-04 1.74 953
1580 chrX 9807045 9810749 3705 * 1580 2.004433e-04 3.58 954
1715 chrX 23207310 23208119 810 * 1715 2.004433e-04 2.30 955
1716 chrX 23215465 23216194 730 * 1716 2.004433e-04 3.07 956
1732 chrX 23535895 23536622 728 * 1732 2.004433e-04 2.34 957
24 chr2L 1389583 1392022 2440 * 24 2.073920e-04 3.17 958
28 chr2L 1437129 1441946 4818 * 28 2.073920e-04 2.52 959
39 chr2L 1961450 1963255 1806 * 39 2.073920e-04 2.57 960
41 chr2L 2195565 2197612 2048 * 41 2.073920e-04 1.52 961
46 chr2L 2404893 2406742 1850 * 46 2.073920e-04 1.61 962
84 chr2L 5923387 5928075 4689 * 84 2.073920e-04 1.58 963
97 chr2L 6544546 6545916 1371 * 97 2.073920e-04 1.68 964
149 chr2L 9587095 9588574 1480 * 149 2.073920e-04 2.11 965
153 chr2L 9971360 9973736 2377 * 153 2.073920e-04 1.73 966
156 chr2L 10230355 10232265 1911 * 156 2.073920e-04 2.56 967
171 chr2L 12054497 12056809 2313 * 171 2.073920e-04 2.67 968
186 chr2L 14137579 14143316 5738 * 186 2.073920e-04 1.88 969
204 chr2L 15499169 15501091 1923 * 204 2.073920e-04 2.25 970
209 chr2L 16255053 16258045 2993 * 209 2.073920e-04 2.22 971
210 chr2L 16261428 16263606 2179 * 210 2.073920e-04 1.70 972
211 chr2L 16268982 16272633 3652 * 211 2.073920e-04 1.96 973
221 chr2L 17563605 17565984 2380 * 221 2.073920e-04 2.20 974
223 chr2L 17720905 17723447 2543 * 223 2.073920e-04 2.07 975
247 chr2L 19361057 19364472 3416 * 247 2.073920e-04 2.05 976
255 chr2L 19787658 19791848 4191 * 255 2.073920e-04 2.30 977
259 chr2L 20416531 20418240 1710 * 259 2.073920e-04 2.38 978
265 chr2L 20935783 20939530 3748 * 265 2.073920e-04 1.53 979
268 chr2L 21032139 21037114 4976 * 268 2.073920e-04 2.11 980
276 chr2L 21752566 21754322 1757 * 276 2.073920e-04 2.39 981
303 chr2R 6602968 6606396 3429 * 303 2.073920e-04 1.51 982
325 chr2R 8019943 8022313 2371 * 325 2.073920e-04 1.91 983
334 chr2R 8243122 8245257 2136 * 334 2.073920e-04 2.28 984
347 chr2R 9419945 9422378 2434 * 347 2.073920e-04 1.45 985
349 chr2R 9576355 9579770 3416 * 349 2.073920e-04 1.71 986
358 chr2R 10123780 10126017 2238 * 358 2.073920e-04 2.23 987
373 chr2R 10899511 10902461 2951 * 373 2.073920e-04 2.09 988
376 chr2R 11170822 11174678 3857 * 376 2.073920e-04 2.14 989
379 chr2R 11397138 11398619 1482 * 379 2.073920e-04 1.53 990
383 chr2R 11606715 11611474 4760 * 383 2.073920e-04 1.31 991
385 chr2R 11650874 11652553 1680 * 385 2.073920e-04 1.98 992
429 chr2R 13956501 13958013 1513 * 429 2.073920e-04 1.74 993
464 chr2R 16328960 16330720 1761 * 464 2.073920e-04 1.85 994
480 chr2R 17332896 17334882 1987 * 480 2.073920e-04 1.43 995
487 chr2R 17547223 17549170 1948 * 487 2.073920e-04 1.65 996
519 chr2R 20667685 20669005 1321 * 519 2.073920e-04 1.56 997
524 chr2R 20907399 20909932 2534 * 524 2.073920e-04 3.06 998
525 chr2R 20924200 20928327 4128 * 525 2.073920e-04 1.64 999
528 chr2R 20958509 20960368 1860 * 528 2.073920e-04 1.41 1000
536 chr2R 21311914 21313736 1823 * 536 2.073920e-04 1.49 1001
561 chr2R 23078246 23079441 1196 * 561 2.073920e-04 3.03 1002
574 chr2R 23873272 23874862 1591 * 574 2.073920e-04 1.44 1003
584 chr2R 24298717 24301906 3190 * 584 2.073920e-04 1.79 1004
586 chr2R 24941554 24943019 1466 * 586 2.073920e-04 1.83 1005
612 chr3L 345525 346579 1055 * 612 2.073920e-04 2.34 1006
618 chr3L 616923 619344 2422 * 618 2.073920e-04 2.38 1007
623 chr3L 654184 655143 960 * 623 2.073920e-04 1.87 1008
647 chr3L 1601439 1603034 1596 * 647 2.073920e-04 1.76 1009
653 chr3L 2551978 2554802 2825 * 653 2.073920e-04 3.26 1010
654 chr3L 2583217 2587911 4695 * 654 2.073920e-04 1.79 1011
667 chr3L 3218189 3219454 1266 * 667 2.073920e-04 1.74 1012
680 chr3L 4075693 4078863 3171 * 680 2.073920e-04 1.93 1013
705 chr3L 5994227 5998355 4129 * 705 2.073920e-04 2.10 1014
710 chr3L 6161621 6163423 1803 * 710 2.073920e-04 2.65 1015
717 chr3L 6879689 6882180 2492 * 717 2.073920e-04 2.12 1016
721 chr3L 6977795 6978814 1020 * 721 2.073920e-04 1.54 1017
722 chr3L 7163917 7165070 1154 * 722 2.073920e-04 1.70 1018
727 chr3L 7709789 7717327 7539 * 727 2.073920e-04 2.94 1019
731 chr3L 8055012 8056439 1428 * 731 2.073920e-04 2.57 1020
744 chr3L 9369829 9371790 1962 * 744 2.073920e-04 1.85 1021
753 chr3L 9716965 9718721 1757 * 753 2.073920e-04 2.84 1022
770 chr3L 10817498 10819424 1927 * 770 2.073920e-04 2.74 1023
774 chr3L 10849315 10852297 2983 * 774 2.073920e-04 2.43 1024
786 chr3L 11871243 11875325 4083 * 786 2.073920e-04 1.73 1025
801 chr3L 12681322 12683276 1955 * 801 2.073920e-04 1.28 1026
804 chr3L 12753777 12755758 1982 * 804 2.073920e-04 2.68 1027
805 chr3L 12802687 12806604 3918 * 805 2.073920e-04 2.00 1028
808 chr3L 13153516 13156158 2643 * 808 2.073920e-04 1.87 1029
817 chr3L 13655250 13660533 5284 * 817 2.073920e-04 1.66 1030
819 chr3L 13918461 13921196 2736 * 819 2.073920e-04 2.07 1031
847 chr3L 15671678 15674600 2923 * 847 2.073920e-04 2.25 1032
874 chr3L 17015165 17016874 1710 * 874 2.073920e-04 2.45 1033
884 chr3L 18075585 18079036 3452 * 884 2.073920e-04 2.61 1034
900 chr3L 18857427 18860783 3357 * 900 2.073920e-04 1.39 1035
944 chr3L 21859755 21862269 2515 * 944 2.073920e-04 1.74 1036
973 chr3L 22944088 22946757 2670 * 973 2.073920e-04 1.93 1037
1014 chr3R 4828993 4830242 1250 * 1014 2.073920e-04 2.53 1038
1026 chr3R 5024692 5026275 1584 * 1026 2.073920e-04 2.88 1039
1039 chr3R 5570729 5572932 2204 * 1039 2.073920e-04 2.68 1040
1041 chr3R 5606104 5607433 1330 * 1041 2.073920e-04 2.68 1041
1046 chr3R 5719854 5721771 1918 * 1046 2.073920e-04 1.86 1042
1057 chr3R 8125747 8127294 1548 * 1057 2.073920e-04 2.15 1043
1065 chr3R 8807071 8809180 2110 * 1065 2.073920e-04 2.11 1044
1069 chr3R 8919699 8921512 1814 * 1069 2.073920e-04 1.35 1045
1073 chr3R 9038095 9040168 2074 * 1073 2.073920e-04 2.09 1046
1077 chr3R 9336703 9340272 3570 * 1077 2.073920e-04 1.66 1047
1079 chr3R 9395236 9397699 2464 * 1079 2.073920e-04 1.79 1048
1093 chr3R 10391933 10393354 1422 * 1093 2.073920e-04 1.87 1049
1097 chr3R 10557117 10559531 2415 * 1097 2.073920e-04 2.25 1050
1102 chr3R 10883911 10887276 3366 * 1102 2.073920e-04 1.89 1051
1103 chr3R 11242484 11245104 2621 * 1103 2.073920e-04 2.96 1052
1108 chr3R 11288840 11293746 4907 * 1108 2.073920e-04 1.93 1053
1118 chr3R 11622440 11624464 2025 * 1118 2.073920e-04 1.67 1054
1130 chr3R 12423020 12424730 1711 * 1130 2.073920e-04 2.89 1055
1157 chr3R 15559861 15563702 3842 * 1157 2.073920e-04 1.71 1056
1161 chr3R 15934401 15935690 1290 * 1161 2.073920e-04 3.52 1057
1164 chr3R 16150701 16152205 1505 * 1164 2.073920e-04 1.40 1058
1180 chr3R 17499698 17502787 3090 * 1180 2.073920e-04 1.77 1059
1209 chr3R 19068219 19069726 1508 * 1209 2.073920e-04 2.01 1060
1219 chr3R 20633877 20636394 2518 * 1219 2.073920e-04 1.50 1061
1264 chr3R 22726196 22728493 2298 * 1264 2.073920e-04 1.94 1062
1267 chr3R 22894913 22899574 4662 * 1267 2.073920e-04 1.89 1063
1276 chr3R 23983616 23984866 1251 * 1276 2.073920e-04 1.66 1064
1285 chr3R 24271165 24272696 1532 * 1285 2.073920e-04 2.08 1065
1297 chr3R 25049853 25052112 2260 * 1297 2.073920e-04 2.00 1066
1312 chr3R 26005525 26006767 1243 * 1312 2.073920e-04 1.91 1067
1332 chr3R 27849098 27851994 2897 * 1332 2.073920e-04 1.49 1068
1356 chr3R 30019891 30022547 2657 * 1356 2.073920e-04 1.83 1069
1365 chr3R 30246671 30249487 2817 * 1365 2.073920e-04 2.41 1070
1383 chr3R 31221381 31222544 1164 * 1383 2.073920e-04 2.87 1071
1391 chr3R 31724254 31725829 1576 * 1391 2.073920e-04 1.78 1072
1392 chr3R 31725981 31727238 1258 * 1392 2.073920e-04 2.04 1073
1395 chr3R 31809671 31811414 1744 * 1395 2.073920e-04 2.12 1074
1397 chr3R 31821809 31823097 1289 * 1397 2.073920e-04 2.90 1075
1427 chr4 982273 983925 1653 * 1427 2.073920e-04 2.38 1076
1429 chr4 1024208 1028460 4253 * 1429 2.073920e-04 2.73 1077
1437 chrX 533203 535824 2622 * 1437 2.073920e-04 2.46 1078
1438 chrX 603084 605331 2248 * 1438 2.073920e-04 1.55 1079
1444 chrX 692937 696532 3596 * 1444 2.073920e-04 1.74 1080
1459 chrX 1756673 1757785 1113 * 1459 2.073920e-04 2.33 1081
1461 chrX 1813647 1816291 2645 * 1461 2.073920e-04 1.96 1082
1472 chrX 2302641 2305415 2775 * 1472 2.073920e-04 1.65 1083
1492 chrX 3428371 3430080 1710 * 1492 2.073920e-04 2.05 1084
1508 chrX 4414815 4417772 2958 * 1508 2.073920e-04 2.41 1085
1509 chrX 4526446 4528472 2027 * 1509 2.073920e-04 2.13 1086
1514 chrX 5552496 5554948 2453 * 1514 2.073920e-04 2.43 1087
1520 chrX 5763211 5764083 873 * 1520 2.073920e-04 2.46 1088
1540 chrX 7149290 7150691 1402 * 1540 2.073920e-04 2.09 1089
1542 chrX 7164101 7165207 1107 * 1542 2.073920e-04 1.81 1090
1543 chrX 7232698 7235793 3096 * 1543 2.073920e-04 2.28 1091
1550 chrX 7614623 7616097 1475 * 1550 2.073920e-04 1.30 1092
1565 chrX 8436028 8436859 832 * 1565 2.073920e-04 2.85 1093
1566 chrX 8522863 8525683 2821 * 1566 2.073920e-04 2.67 1094
1570 chrX 8890810 8893228 2419 * 1570 2.073920e-04 1.85 1095
1579 chrX 9766952 9770078 3127 * 1579 2.073920e-04 1.84 1096
1584 chrX 10501683 10504080 2398 * 1584 2.073920e-04 1.52 1097
1597 chrX 11146226 11149821 3596 * 1597 2.073920e-04 2.04 1098
1603 chrX 11786809 11788661 1853 * 1603 2.073920e-04 3.07 1099
1605 chrX 11979832 11984435 4604 * 1605 2.073920e-04 3.00 1100
1610 chrX 12356366 12359398 3033 * 1610 2.073920e-04 1.77 1101
1615 chrX 12616492 12617847 1356 * 1615 2.073920e-04 3.01 1102
1648 chrX 15692437 15693659 1223 * 1648 2.073920e-04 1.55 1103
1659 chrX 16254697 16257328 2632 * 1659 2.073920e-04 2.59 1104
1674 chrX 17656740 17658883 2144 * 1674 2.073920e-04 2.31 1105
1676 chrX 17738410 17740704 2295 * 1676 2.073920e-04 1.88 1106
1684 chrX 19013897 19017936 4040 * 1684 2.073920e-04 1.58 1107
1693 chrX 19520739 19522239 1501 * 1693 2.073920e-04 2.30 1108
1699 chrX 19788051 19791165 3115 * 1699 2.073920e-04 1.94 1109
1700 chrX 19825329 19829478 4150 * 1700 2.073920e-04 1.97 1110
1708 chrX 20716657 20718215 1559 * 1708 2.073920e-04 1.76 1111
1709 chrX 20718774 20721590 2817 * 1709 2.073920e-04 1.52 1112
14 chr2L 454087 456365 2279 * 14 5.230031e-04 1.28 1113
37 chr2L 1947545 1950130 2586 * 37 5.230031e-04 1.99 1114
88 chr2L 6036536 6038119 1584 * 88 5.230031e-04 1.27 1115
129 chr2L 8785956 8790923 4968 * 129 5.230031e-04 1.29 1116
181 chr2L 13865471 13867151 1681 * 181 5.230031e-04 1.62 1117
280 chr2L 22081127 22082917 1791 * 280 5.230031e-04 1.07 1118
283 chr2R 4864194 4864637 444 * 283 5.230031e-04 1.58 1119
310 chr2R 6749016 6752460 3445 * 310 5.230031e-04 2.63 1120
350 chr2R 9584818 9585995 1178 * 350 5.230031e-04 1.73 1121
410 chr2R 13067178 13068717 1540 * 410 5.230031e-04 1.54 1122
475 chr2R 17031431 17033157 1727 * 475 5.230031e-04 1.04 1123
571 chr2R 23849713 23850618 906 * 571 5.230031e-04 2.17 1124
813 chr3L 13254988 13255440 453 * 813 5.230031e-04 1.00 1125
990 chr3R 109594 112745 3152 * 990 5.230031e-04 1.12 1126
1006 chr3R 504165 507251 3087 * 1006 5.230031e-04 1.42 1127
1111 chr3R 11311769 11313893 2125 * 1111 5.230031e-04 1.53 1128
1407 chr4 204948 206505 1558 * 1407 5.230031e-04 1.42 1129
1447 chrX 862190 866920 4731 * 1447 5.230031e-04 1.11 1130
1449 chrX 908099 910614 2516 * 1449 5.230031e-04 1.63 1131
1578 chrX 9689041 9689889 849 * 1578 5.230031e-04 1.23 1132
1637 chrX 14753383 14755411 2029 * 1637 5.230031e-04 1.41 1133
1719 chrX 23233649 23234335 687 * 1719 5.230031e-04 1.14 1134
6 chr2L 153858 155609 1752 * 6 8.289937e-04 3.26 1135
38 chr2L 1953177 1954533 1357 * 38 8.289937e-04 2.42 1136
53 chr2L 2766408 2767281 874 * 53 8.289937e-04 2.79 1137
128 chr2L 8759364 8762856 3493 * 128 8.289937e-04 2.00 1138
150 chr2L 9607501 9609269 1769 * 150 8.289937e-04 2.74 1139
166 chr2L 11357189 11359654 2466 * 166 8.289937e-04 2.14 1140
196 chr2L 15426580 15427257 678 * 196 8.289937e-04 3.27 1141
220 chr2L 17560028 17561790 1763 * 220 8.289937e-04 3.59 1142
258 chr2L 19935232 19936854 1623 * 258 8.289937e-04 2.39 1143
260 chr2L 20615419 20616656 1238 * 260 8.289937e-04 1.92 1144
263 chr2L 20799328 20801909 2582 * 263 8.289937e-04 2.41 1145
264 chr2L 20820926 20824227 3302 * 264 8.289937e-04 3.09 1146
309 chr2R 6711399 6713280 1882 * 309 8.289937e-04 2.80 1147
355 chr2R 9968570 9969710 1141 * 355 8.289937e-04 2.21 1148
359 chr2R 10251009 10252730 1722 * 359 8.289937e-04 3.80 1149
418 chr2R 13447214 13450057 2844 * 418 8.289937e-04 2.67 1150
448 chr2R 15308391 15310136 1746 * 448 8.289937e-04 1.91 1151
465 chr2R 16369704 16371702 1999 * 465 8.289937e-04 2.42 1152
510 chr2R 19491720 19493553 1834 * 510 8.289937e-04 2.37 1153
511 chr2R 19779823 19781957 2135 * 511 8.289937e-04 2.88 1154
533 chr2R 21126790 21128901 2112 * 533 8.289937e-04 2.05 1155
542 chr2R 21711242 21712631 1390 * 542 8.289937e-04 2.80 1156
559 chr2R 22923956 22926106 2151 * 559 8.289937e-04 2.37 1157
608 chr3L 273954 274846 893 * 608 8.289937e-04 2.30 1158
676 chr3L 3869868 3871260 1393 * 676 8.289937e-04 2.44 1159
697 chr3L 5751535 5752752 1218 * 697 8.289937e-04 2.54 1160
707 chr3L 6104340 6106220 1881 * 707 8.289937e-04 2.30 1161
720 chr3L 6940307 6942720 2414 * 720 8.289937e-04 2.63 1162
730 chr3L 7978564 7982838 4275 * 730 8.289937e-04 2.37 1163
734 chr3L 8224541 8226716 2176 * 734 8.289937e-04 2.73 1164
822 chr3L 14037510 14039004 1495 * 822 8.289937e-04 3.64 1165
832 chr3L 14551009 14552669 1661 * 832 8.289937e-04 2.08 1166
842 chr3L 15470682 15472868 2187 * 842 8.289937e-04 2.19 1167
850 chr3L 15814820 15816405 1586 * 850 8.289937e-04 1.89 1168
872 chr3L 16955352 16956689 1338 * 872 8.289937e-04 3.05 1169
880 chr3L 17994085 17996059 1975 * 880 8.289937e-04 3.11 1170
889 chr3L 18289058 18291772 2715 * 889 8.289937e-04 2.21 1171
894 chr3L 18422761 18425869 3109 * 894 8.289937e-04 2.74 1172
903 chr3L 19584391 19585625 1235 * 903 8.289937e-04 2.26 1173
911 chr3L 19906428 19907768 1341 * 911 8.289937e-04 3.57 1174
919 chr3L 20384048 20385981 1934 * 919 8.289937e-04 1.77 1175
1037 chr3R 5231835 5233537 1703 * 1037 8.289937e-04 1.96 1176
1049 chr3R 5730736 5732436 1701 * 1049 8.289937e-04 2.70 1177
1062 chr3R 8731347 8732545 1199 * 1062 8.289937e-04 2.37 1178
1091 chr3R 10268335 10271213 2879 * 1091 8.289937e-04 2.80 1179
1142 chr3R 14006170 14007625 1456 * 1142 8.289937e-04 2.34 1180
1145 chr3R 14324783 14327324 2542 * 1145 8.289937e-04 2.53 1181
1149 chr3R 14621956 14623646 1691 * 1149 8.289937e-04 2.10 1182
1150 chr3R 14624356 14626492 2137 * 1150 8.289937e-04 2.70 1183
1221 chr3R 20772950 20774657 1708 * 1221 8.289937e-04 2.43 1184
1302 chr3R 25176234 25179033 2800 * 1302 8.289937e-04 2.23 1185
1306 chr3R 25595589 25596937 1349 * 1306 8.289937e-04 2.26 1186
1359 chr3R 30045995 30047321 1327 * 1359 8.289937e-04 2.16 1187
1388 chr3R 31682207 31683359 1153 * 1388 8.289937e-04 2.53 1188
1425 chr4 833126 834797 1672 * 1425 8.289937e-04 2.67 1189
1426 chr4 973378 975201 1824 * 1426 8.289937e-04 1.94 1190
1501 chrX 3744391 3750245 5855 * 1501 8.289937e-04 2.25 1191
1575 chrX 9579207 9580097 891 * 1575 8.289937e-04 2.41 1192
1616 chrX 12653868 12655008 1141 * 1616 8.289937e-04 2.31 1193
1651 chrX 15758736 15760517 1782 * 1651 8.289937e-04 4.18 1194
1658 chrX 16102848 16104986 2139 * 1658 8.289937e-04 2.20 1195
1664 chrX 16606311 16608163 1853 * 1664 8.289937e-04 2.81 1196
1690 chrX 19479593 19480635 1043 * 1690 8.289937e-04 2.26 1197
1714 chrX 21367096 21369708 2613 * 1714 8.289937e-04 2.45 1198
311 chr2R 6764694 6766574 1881 * 311 1.051888e-03 1.63 1199
378 chr2R 11219121 11220960 1840 * 378 1.051888e-03 1.53 1200
392 chr2R 12170133 12172569 2437 * 392 1.051888e-03 1.68 1201
567 chr2R 23591280 23592126 847 * 567 1.051888e-03 1.89 1202
640 chr3L 1196032 1197242 1211 * 640 1.051888e-03 1.66 1203
1165 chr3R 16215896 16217464 1569 * 1165 1.051888e-03 1.86 1204
1204 chr3R 18735761 18736624 864 * 1204 1.051888e-03 1.43 1205
1453 chrX 1412279 1413418 1140 * 1453 1.051888e-03 1.62 1206
1510 chrX 4649503 4650476 974 * 1510 1.051888e-03 2.06 1207
1560 chrX 8140829 8142871 2043 * 1560 1.051888e-03 2.07 1208
1627 chrX 13384382 13384984 603 * 1627 1.051888e-03 2.55 1209
1642 chrX 15592974 15593798 825 * 1642 1.051888e-03 1.89 1210
1643 chrX 15656995 15657871 877 * 1643 1.051888e-03 1.95 1211
63 chr2L 3712747 3713559 813 * 63 1.402715e-03 3.11 1212
344 chr2R 8813394 8814785 1392 * 344 1.402715e-03 3.05 1213
404 chr2R 12779694 12781236 1543 * 404 1.402715e-03 3.11 1214
424 chr2R 13735628 13738042 2415 * 424 1.402715e-03 3.41 1215
463 chr2R 16179396 16182232 2837 * 463 1.402715e-03 4.22 1216
504 chr2R 18717122 18719556 2435 * 504 1.402715e-03 3.24 1217
685 chr3L 4160786 4161597 812 * 685 1.402715e-03 2.97 1218
807 chr3L 13091847 13096030 4184 * 807 1.402715e-03 3.38 1219
1162 chr3R 15972167 15974956 2790 * 1162 1.402715e-03 3.29 1220
1214 chr3R 19324472 19325115 644 * 1214 1.402715e-03 2.90 1221
1281 chr3R 24229751 24232635 2885 * 1281 1.402715e-03 3.06 1222
1298 chr3R 25069405 25070361 957 * 1298 1.402715e-03 3.39 1223
1564 chrX 8419987 8421568 1582 * 1564 1.402715e-03 3.33 1224
66 chr2L 3839669 3841636 1968 * 66 1.634508e-03 1.66 1225
218 chr2L 17476916 17477874 959 * 218 1.634508e-03 2.00 1226
237 chr2L 19050780 19052380 1601 * 237 1.634508e-03 1.28 1227
245 chr2L 19226508 19231371 4864 * 245 1.634508e-03 1.49 1228
284 chr2R 4866972 4868249 1278 * 284 1.634508e-03 1.55 1229
312 chr2R 6810414 6812529 2116 * 312 1.634508e-03 1.42 1230
416 chr2R 13326095 13328478 2384 * 416 1.634508e-03 1.63 1231
516 chr2R 20136376 20137200 825 * 516 1.634508e-03 1.17 1232
527 chr2R 20954609 20956002 1394 * 527 1.634508e-03 1.79 1233
530 chr2R 21038768 21039980 1213 * 530 1.634508e-03 2.20 1234
568 chr2R 23607969 23609456 1488 * 568 1.634508e-03 1.39 1235
661 chr3L 2975404 2976778 1375 * 661 1.634508e-03 1.29 1236
695 chr3L 5652837 5653985 1149 * 695 1.634508e-03 1.33 1237
737 chr3L 8421130 8422856 1727 * 737 1.634508e-03 1.41 1238
815 chr3L 13487747 13489800 2054 * 815 1.634508e-03 1.53 1239
975 chr3L 23113739 23115213 1475 * 975 1.634508e-03 1.38 1240
1013 chr3R 4821036 4824714 3679 * 1013 1.634508e-03 1.20 1241
1237 chr3R 21516167 21518958 2792 * 1237 1.634508e-03 1.38 1242
1434 chrX 493398 495059 1662 * 1434 1.634508e-03 1.26 1243
1483 chrX 2640435 2644552 4118 * 1483 1.634508e-03 1.96 1244
1695 chrX 19693828 19695524 1697 * 1695 1.634508e-03 2.03 1245
1717 chrX 23217780 23219066 1287 * 1717 1.634508e-03 1.28 1246
1733 chrY 990025 990530 506 * 1733 1.634508e-03 1.75 1247
20 chr2L 1235572 1237401 1830 * 20 1.888182e-03 1.70 1248
29 chr2L 1450066 1451290 1225 * 29 1.888182e-03 2.31 1249
57 chr2L 2999301 3000722 1422 * 57 1.888182e-03 1.71 1250
58 chr2L 3147045 3148154 1110 * 58 1.888182e-03 1.68 1251
60 chr2L 3449866 3450584 719 * 60 1.888182e-03 2.54 1252
61 chr2L 3673660 3676657 2998 * 61 1.888182e-03 2.04 1253
77 chr2L 5095825 5097125 1301 * 77 1.888182e-03 2.18 1254
78 chr2L 5105913 5109183 3271 * 78 1.888182e-03 1.85 1255
81 chr2L 5429904 5432338 2435 * 81 1.888182e-03 1.82 1256
101 chr2L 6912798 6915060 2263 * 101 1.888182e-03 3.21 1257
103 chr2L 6966405 6968741 2337 * 103 1.888182e-03 1.82 1258
133 chr2L 8818058 8818739 682 * 133 1.888182e-03 1.44 1259
141 chr2L 9271292 9273128 1837 * 141 1.888182e-03 1.91 1260
151 chr2L 9613559 9615144 1586 * 151 1.888182e-03 2.22 1261
191 chr2L 14574593 14577861 3269 * 191 1.888182e-03 1.54 1262
192 chr2L 14815151 14818476 3326 * 192 1.888182e-03 1.81 1263
194 chr2L 14873638 14876095 2458 * 194 1.888182e-03 2.03 1264
206 chr2L 15735055 15736951 1897 * 206 1.888182e-03 2.20 1265
251 chr2L 19532870 19534556 1687 * 251 1.888182e-03 1.89 1266
253 chr2L 19586212 19587875 1664 * 253 1.888182e-03 1.60 1267
269 chr2L 21167518 21169828 2311 * 269 1.888182e-03 2.33 1268
277 chr2L 21756026 21758234 2209 * 277 1.888182e-03 3.00 1269
278 chr2L 21827075 21829260 2186 * 278 1.888182e-03 1.80 1270
282 chr2R 4787558 4788950 1393 * 282 1.888182e-03 1.96 1271
285 chr2R 5090153 5092703 2551 * 285 1.888182e-03 1.82 1272
290 chr2R 5836463 5838401 1939 * 290 1.888182e-03 2.19 1273
291 chr2R 5955135 5956544 1410 * 291 1.888182e-03 1.80 1274
356 chr2R 10047942 10050746 2805 * 356 1.888182e-03 1.57 1275
371 chr2R 10831579 10833565 1987 * 371 1.888182e-03 1.85 1276
377 chr2R 11202341 11203853 1513 * 377 1.888182e-03 2.13 1277
381 chr2R 11402556 11405172 2617 * 381 1.888182e-03 1.87 1278
384 chr2R 11630734 11634562 3829 * 384 1.888182e-03 2.33 1279
397 chr2R 12557617 12558745 1129 * 397 1.888182e-03 1.83 1280
412 chr2R 13132275 13133435 1161 * 412 1.888182e-03 2.12 1281
415 chr2R 13304099 13306633 2535 * 415 1.888182e-03 3.04 1282
439 chr2R 14813214 14817185 3972 * 439 1.888182e-03 1.84 1283
454 chr2R 15540467 15541687 1221 * 454 1.888182e-03 1.82 1284
459 chr2R 15999583 16001691 2109 * 459 1.888182e-03 1.59 1285
476 chr2R 17183846 17186828 2983 * 476 1.888182e-03 1.86 1286
477 chr2R 17191107 17195634 4528 * 477 1.888182e-03 1.47 1287
491 chr2R 17809399 17810681 1283 * 491 1.888182e-03 1.91 1288
493 chr2R 18140103 18142903 2801 * 493 1.888182e-03 1.56 1289
496 chr2R 18232659 18233620 962 * 496 1.888182e-03 1.85 1290
497 chr2R 18287257 18289241 1985 * 497 1.888182e-03 2.15 1291
498 chr2R 18317159 18323028 5870 * 498 1.888182e-03 1.78 1292
520 chr2R 20834760 20835981 1222 * 520 1.888182e-03 2.81 1293
521 chr2R 20836273 20837733 1461 * 521 1.888182e-03 1.70 1294
537 chr2R 21322577 21324995 2419 * 537 1.888182e-03 2.50 1295
549 chr2R 22456710 22458298 1589 * 549 1.888182e-03 1.76 1296
555 chr2R 22592215 22593762 1548 * 555 1.888182e-03 2.20 1297
563 chr2R 23382890 23385205 2316 * 563 1.888182e-03 2.09 1298
576 chr2R 23939326 23940773 1448 * 576 1.888182e-03 1.62 1299
577 chr2R 23942920 23944242 1323 * 577 1.888182e-03 2.07 1300
595 chr3L 32353 34031 1679 * 595 1.888182e-03 1.96 1301
606 chr3L 262568 264528 1961 * 606 1.888182e-03 1.86 1302
611 chr3L 318444 320504 2061 * 611 1.888182e-03 2.63 1303
648 chr3L 1648494 1649770 1277 * 648 1.888182e-03 2.07 1304
650 chr3L 1689755 1691223 1469 * 650 1.888182e-03 1.70 1305
651 chr3L 2262080 2263389 1310 * 651 1.888182e-03 2.45 1306
665 chr3L 3162219 3162800 582 * 665 1.888182e-03 2.25 1307
688 chr3L 4360274 4364539 4266 * 688 1.888182e-03 1.71 1308
699 chr3L 5875334 5876899 1566 * 699 1.888182e-03 2.37 1309
701 chr3L 5881029 5882830 1802 * 701 1.888182e-03 2.20 1310
709 chr3L 6158703 6161110 2408 * 709 1.888182e-03 1.95 1311
736 chr3L 8411288 8412298 1011 * 736 1.888182e-03 2.20 1312
762 chr3L 10362320 10365510 3191 * 762 1.888182e-03 1.48 1313
784 chr3L 11491210 11493739 2530 * 784 1.888182e-03 1.86 1314
812 chr3L 13225733 13229692 3960 * 812 1.888182e-03 2.06 1315
824 chr3L 14113861 14115572 1712 * 824 1.888182e-03 1.62 1316
831 chr3L 14409694 14411192 1499 * 831 1.888182e-03 2.45 1317
833 chr3L 14564977 14566696 1720 * 833 1.888182e-03 1.82 1318
860 chr3L 16227802 16230419 2618 * 860 1.888182e-03 1.94 1319
866 chr3L 16659529 16661983 2455 * 866 1.888182e-03 2.66 1320
882 chr3L 18017737 18019434 1698 * 882 1.888182e-03 1.74 1321
887 chr3L 18108822 18110536 1715 * 887 1.888182e-03 2.02 1322
890 chr3L 18295726 18298504 2779 * 890 1.888182e-03 1.80 1323
896 chr3L 18626096 18627443 1348 * 896 1.888182e-03 3.34 1324
904 chr3L 19586370 19587084 715 * 904 1.888182e-03 1.77 1325
906 chr3L 19634339 19635960 1622 * 906 1.888182e-03 1.69 1326
923 chr3L 20471586 20473466 1881 * 923 1.888182e-03 2.20 1327
932 chr3L 21190109 21192878 2770 * 932 1.888182e-03 1.92 1328
933 chr3L 21209682 21213435 3754 * 933 1.888182e-03 2.87 1329
937 chr3L 21532496 21533663 1168 * 937 1.888182e-03 1.97 1330
938 chr3L 21587704 21588640 937 * 938 1.888182e-03 1.72 1331
957 chr3L 22325048 22328427 3380 * 957 1.888182e-03 3.17 1332
959 chr3L 22380650 22383826 3177 * 959 1.888182e-03 1.81 1333
960 chr3L 22393940 22397316 3377 * 960 1.888182e-03 2.08 1334
1009 chr3R 4318809 4321483 2675 * 1009 1.888182e-03 2.13 1335
1011 chr3R 4659339 4660793 1455 * 1011 1.888182e-03 1.91 1336
1034 chr3R 5203374 5205500 2127 * 1034 1.888182e-03 3.23 1337
1044 chr3R 5685256 5687924 2669 * 1044 1.888182e-03 2.35 1338
1051 chr3R 6432293 6435081 2789 * 1051 1.888182e-03 2.42 1339
1052 chr3R 7085365 7087507 2143 * 1052 1.888182e-03 2.24 1340
1056 chr3R 7138496 7140197 1702 * 1056 1.888182e-03 1.76 1341
1059 chr3R 8307762 8308619 858 * 1059 1.888182e-03 1.58 1342
1078 chr3R 9349175 9351079 1905 * 1078 1.888182e-03 1.94 1343
1086 chr3R 10056054 10059433 3380 * 1086 1.888182e-03 1.88 1344
1151 chr3R 14630066 14631282 1217 * 1151 1.888182e-03 1.88 1345
1152 chr3R 14712255 14714958 2704 * 1152 1.888182e-03 2.58 1346
1172 chr3R 16397906 16398976 1071 * 1172 1.888182e-03 1.69 1347
1181 chr3R 17539703 17540779 1077 * 1181 1.888182e-03 1.85 1348
1200 chr3R 18402608 18404003 1396 * 1200 1.888182e-03 1.82 1349
1206 chr3R 18916547 18918329 1783 * 1206 1.888182e-03 2.05 1350
1212 chr3R 19314085 19315438 1354 * 1212 1.888182e-03 1.77 1351
1224 chr3R 20794713 20796271 1559 * 1224 1.888182e-03 2.10 1352
1229 chr3R 21223281 21224671 1391 * 1229 1.888182e-03 1.83 1353
1233 chr3R 21359082 21360963 1882 * 1233 1.888182e-03 1.67 1354
1234 chr3R 21364728 21365929 1202 * 1234 1.888182e-03 1.82 1355
1236 chr3R 21387377 21388842 1466 * 1236 1.888182e-03 1.75 1356
1260 chr3R 22527039 22528627 1589 * 1260 1.888182e-03 2.27 1357
1292 chr3R 24606186 24609515 3330 * 1292 1.888182e-03 2.22 1358
1296 chr3R 24999892 25002540 2649 * 1296 1.888182e-03 1.76 1359
1300 chr3R 25137393 25138459 1067 * 1300 1.888182e-03 1.75 1360
1316 chr3R 26027161 26028038 878 * 1316 1.888182e-03 2.32 1361
1326 chr3R 27287981 27288960 980 * 1326 1.888182e-03 1.59 1362
1343 chr3R 29122028 29124219 2192 * 1343 1.888182e-03 2.97 1363
1370 chr3R 30393365 30394071 707 * 1370 1.888182e-03 1.91 1364
1402 chr3R 32051460 32053142 1683 * 1402 1.888182e-03 1.96 1365
1405 chr4 75601 76544 944 * 1405 1.888182e-03 2.02 1366
1411 chr4 409618 412610 2993 * 1411 1.888182e-03 2.10 1367
1477 chrX 2363085 2364576 1492 * 1477 1.888182e-03 1.61 1368
1478 chrX 2387424 2388138 715 * 1478 1.888182e-03 2.05 1369
1485 chrX 2986976 2988482 1507 * 1485 1.888182e-03 3.18 1370
1499 chrX 3718350 3719678 1329 * 1499 1.888182e-03 2.37 1371
1502 chrX 3796941 3798384 1444 * 1502 1.888182e-03 1.82 1372
1507 chrX 4410978 4413883 2906 * 1507 1.888182e-03 2.12 1373
1526 chrX 6278618 6280467 1850 * 1526 1.888182e-03 1.89 1374
1548 chrX 7595975 7596499 525 * 1548 1.888182e-03 1.82 1375
1556 chrX 7891415 7892225 811 * 1556 1.888182e-03 1.71 1376
1563 chrX 8397629 8399972 2344 * 1563 1.888182e-03 2.07 1377
1573 chrX 9162161 9165819 3659 * 1573 1.888182e-03 1.74 1378
1590 chrX 10697154 10698299 1146 * 1590 1.888182e-03 1.87 1379
1592 chrX 10743829 10745590 1762 * 1592 1.888182e-03 2.03 1380
1611 chrX 12533720 12537244 3525 * 1611 1.888182e-03 2.18 1381
1613 chrX 12582428 12584694 2267 * 1613 1.888182e-03 1.92 1382
1614 chrX 12590385 12593025 2641 * 1614 1.888182e-03 3.10 1383
1621 chrX 12754048 12755576 1529 * 1621 1.888182e-03 1.56 1384
1656 chrX 15910245 15911822 1578 * 1656 1.888182e-03 1.56 1385
1660 chrX 16288575 16290110 1536 * 1660 1.888182e-03 2.34 1386
1666 chrX 16654230 16656293 2064 * 1666 1.888182e-03 2.08 1387
1669 chrX 17415641 17417030 1390 * 1669 1.888182e-03 1.86 1388
1670 chrX 17536018 17538153 2136 * 1670 1.888182e-03 2.38 1389
1675 chrX 17736537 17738198 1662 * 1675 1.888182e-03 2.19 1390
1679 chrX 18530023 18530963 941 * 1679 1.888182e-03 2.13 1391
1681 chrX 18591416 18592528 1113 * 1681 1.888182e-03 1.96 1392
1687 chrX 19353638 19355509 1872 * 1687 1.888182e-03 1.65 1393
1688 chrX 19425762 19426989 1228 * 1688 1.888182e-03 1.78 1394
1694 chrX 19537120 19538451 1332 * 1694 1.888182e-03 1.93 1395
1703 chrX 19850207 19852598 2392 * 1703 1.888182e-03 2.88 1396
281 chr2R 1233204 1234602 1399 * 281 2.389381e-03 2.76 1397
1357 chr3R 30023412 30023988 577 * 1357 2.389381e-03 2.05 1398
1581 chrX 10301160 10303197 2038 * 1581 2.389381e-03 2.92 1399
16 chr2L 961778 964038 2261 * 16 2.830138e-03 1.66 1400
17 chr2L 1006444 1008941 2498 * 17 2.830138e-03 1.67 1401
25 chr2L 1394973 1397378 2406 * 25 2.830138e-03 1.84 1402
26 chr2L 1417661 1419095 1435 * 26 2.830138e-03 1.71 1403
36 chr2L 1727557 1728544 988 * 36 2.830138e-03 2.31 1404
43 chr2L 2386214 2390142 3929 * 43 2.830138e-03 1.64 1405
45 chr2L 2399712 2402178 2467 * 45 2.830138e-03 1.79 1406
49 chr2L 2700664 2703973 3310 * 49 2.830138e-03 1.53 1407
52 chr2L 2756863 2758900 2038 * 52 2.830138e-03 1.62 1408
54 chr2L 2769884 2770563 680 * 54 2.830138e-03 1.67 1409
59 chr2L 3424568 3429358 4791 * 59 2.830138e-03 2.63 1410
67 chr2L 3842214 3843490 1277 * 67 2.830138e-03 1.81 1411
68 chr2L 3844052 3847565 3514 * 68 2.830138e-03 1.77 1412
72 chr2L 4196521 4198927 2407 * 72 2.830138e-03 1.59 1413
76 chr2L 5036672 5038252 1581 * 76 2.830138e-03 1.67 1414
82 chr2L 5749695 5751562 1868 * 82 2.830138e-03 1.92 1415
83 chr2L 5752479 5754383 1905 * 83 2.830138e-03 1.86 1416
86 chr2L 5981887 5983827 1941 * 86 2.830138e-03 2.75 1417
98 chr2L 6548434 6550451 2018 * 98 2.830138e-03 1.49 1418
102 chr2L 6963963 6964804 842 * 102 2.830138e-03 1.89 1419
105 chr2L 7387414 7388976 1563 * 105 2.830138e-03 1.86 1420
112 chr2L 7809096 7811378 2283 * 112 2.830138e-03 2.43 1421
113 chr2L 7827645 7830726 3082 * 113 2.830138e-03 1.92 1422
115 chr2L 8296076 8298224 2149 * 115 2.830138e-03 1.68 1423
138 chr2L 8871208 8872309 1102 * 138 2.830138e-03 1.86 1424
139 chr2L 9167786 9169663 1878 * 139 2.830138e-03 1.84 1425
140 chr2L 9222432 9224217 1786 * 140 2.830138e-03 2.43 1426
154 chr2L 9990800 9993697 2898 * 154 2.830138e-03 2.12 1427
159 chr2L 10387419 10389701 2283 * 159 2.830138e-03 1.81 1428
160 chr2L 10394849 10398185 3337 * 160 2.830138e-03 1.77 1429
164 chr2L 10753683 10755482 1800 * 164 2.830138e-03 2.89 1430
167 chr2L 11472432 11475478 3047 * 167 2.830138e-03 2.53 1431
174 chr2L 12866365 12868163 1799 * 174 2.830138e-03 1.89 1432
178 chr2L 13782919 13785386 2468 * 178 2.830138e-03 1.64 1433
187 chr2L 14433164 14435338 2175 * 187 2.830138e-03 1.87 1434
188 chr2L 14479276 14483271 3996 * 188 2.830138e-03 1.38 1435
189 chr2L 14485621 14488000 2380 * 189 2.830138e-03 1.73 1436
193 chr2L 14865460 14871176 5717 * 193 2.830138e-03 2.41 1437
216 chr2L 17380578 17383544 2967 * 216 2.830138e-03 1.84 1438
229 chr2L 18772316 18773974 1659 * 229 2.830138e-03 1.98 1439
233 chr2L 18895801 18897678 1878 * 233 2.830138e-03 1.58 1440
248 chr2L 19413460 19414877 1418 * 248 2.830138e-03 2.12 1441
254 chr2L 19772069 19774232 2164 * 254 2.830138e-03 2.17 1442
261 chr2L 20734059 20736321 2263 * 261 2.830138e-03 1.85 1443
266 chr2L 20951966 20954412 2447 * 266 2.830138e-03 2.69 1444
273 chr2L 21379429 21382320 2892 * 273 2.830138e-03 1.58 1445
279 chr2L 21931949 21934563 2615 * 279 2.830138e-03 1.76 1446
305 chr2R 6620857 6622208 1352 * 305 2.830138e-03 1.43 1447
307 chr2R 6662632 6664598 1967 * 307 2.830138e-03 2.08 1448
314 chr2R 7167078 7168382 1305 * 314 2.830138e-03 1.63 1449
322 chr2R 7954026 7956652 2627 * 322 2.830138e-03 2.66 1450
326 chr2R 8047955 8050090 2136 * 326 2.830138e-03 1.36 1451
328 chr2R 8126897 8127682 786 * 328 2.830138e-03 1.38 1452
342 chr2R 8787410 8791424 4015 * 342 2.830138e-03 3.50 1453
345 chr2R 8906351 8907829 1479 * 345 2.830138e-03 2.21 1454
346 chr2R 9291042 9294216 3175 * 346 2.830138e-03 1.68 1455
354 chr2R 9750393 9751770 1378 * 354 2.830138e-03 1.46 1456
370 chr2R 10805470 10808059 2590 * 370 2.830138e-03 1.65 1457
372 chr2R 10859669 10862344 2676 * 372 2.830138e-03 1.98 1458
380 chr2R 11400553 11402092 1540 * 380 2.830138e-03 1.90 1459
399 chr2R 12677681 12680291 2611 * 399 2.830138e-03 1.77 1460
401 chr2R 12700657 12703317 2661 * 401 2.830138e-03 1.75 1461
409 chr2R 13021377 13024032 2656 * 409 2.830138e-03 1.83 1462
411 chr2R 13080597 13083787 3191 * 411 2.830138e-03 1.77 1463
426 chr2R 13920316 13921746 1431 * 426 2.830138e-03 1.75 1464
430 chr2R 13991127 13992641 1515 * 430 2.830138e-03 1.65 1465
433 chr2R 14428323 14429654 1332 * 433 2.830138e-03 2.08 1466
435 chr2R 14434539 14436606 2068 * 435 2.830138e-03 1.23 1467
440 chr2R 14854706 14855679 974 * 440 2.830138e-03 1.69 1468
445 chr2R 14981664 14982961 1298 * 445 2.830138e-03 2.72 1469
446 chr2R 15117219 15118149 931 * 446 2.830138e-03 2.64 1470
449 chr2R 15331568 15333451 1884 * 449 2.830138e-03 2.01 1471
453 chr2R 15530269 15532624 2356 * 453 2.830138e-03 2.14 1472
456 chr2R 15881240 15883042 1803 * 456 2.830138e-03 2.07 1473
462 chr2R 16164718 16166083 1366 * 462 2.830138e-03 2.12 1474
468 chr2R 16498611 16501173 2563 * 468 2.830138e-03 2.50 1475
469 chr2R 16762801 16767109 4309 * 469 2.830138e-03 1.90 1476
470 chr2R 16771000 16772974 1975 * 470 2.830138e-03 1.83 1477
486 chr2R 17477017 17478470 1454 * 486 2.830138e-03 1.99 1478
489 chr2R 17683375 17685253 1879 * 489 2.830138e-03 1.83 1479
495 chr2R 18178171 18179457 1287 * 495 2.830138e-03 2.65 1480
502 chr2R 18444917 18446958 2042 * 502 2.830138e-03 2.21 1481
507 chr2R 19415328 19417350 2023 * 507 2.830138e-03 1.95 1482
515 chr2R 19933022 19934498 1477 * 515 2.830138e-03 1.41 1483
539 chr2R 21573653 21578683 5031 * 539 2.830138e-03 1.51 1484
540 chr2R 21645853 21647416 1564 * 540 2.830138e-03 2.41 1485
543 chr2R 21870818 21874160 3343 * 543 2.830138e-03 2.03 1486
547 chr2R 22372620 22375185 2566 * 547 2.830138e-03 1.80 1487
553 chr2R 22530312 22532805 2494 * 553 2.830138e-03 1.41 1488
554 chr2R 22560870 22562152 1283 * 554 2.830138e-03 1.54 1489
557 chr2R 22688066 22690120 2055 * 557 2.830138e-03 2.22 1490
560 chr2R 22933347 22935047 1701 * 560 2.830138e-03 1.74 1491
573 chr2R 23871873 23872688 816 * 573 2.830138e-03 1.39 1492
587 chr2R 24945222 24946091 870 * 587 2.830138e-03 2.34 1493
588 chr2R 24948139 24949909 1771 * 588 2.830138e-03 1.97 1494
596 chr3L 39173 42397 3225 * 596 2.830138e-03 1.74 1495
600 chr3L 93562 94882 1321 * 600 2.830138e-03 1.48 1496
605 chr3L 205330 206729 1400 * 605 2.830138e-03 1.79 1497
613 chr3L 414333 415665 1333 * 613 2.830138e-03 1.31 1498
619 chr3L 626605 627935 1331 * 619 2.830138e-03 1.66 1499
620 chr3L 632881 634139 1259 * 620 2.830138e-03 1.76 1500
633 chr3L 806661 807411 751 * 633 2.830138e-03 1.46 1501
643 chr3L 1488462 1490782 2321 * 643 2.830138e-03 2.33 1502
658 chr3L 2824142 2831389 7248 * 658 2.830138e-03 1.48 1503
662 chr3L 3044240 3045284 1045 * 662 2.830138e-03 1.54 1504
666 chr3L 3197190 3199395 2206 * 666 2.830138e-03 1.71 1505
668 chr3L 3224381 3227035 2655 * 668 2.830138e-03 2.01 1506
672 chr3L 3435006 3439590 4585 * 672 2.830138e-03 2.69 1507
675 chr3L 3787048 3789453 2406 * 675 2.830138e-03 2.30 1508
677 chr3L 3888283 3890424 2142 * 677 2.830138e-03 1.87 1509
682 chr3L 4082485 4086769 4285 * 682 2.830138e-03 2.56 1510
691 chr3L 4858531 4860851 2321 * 691 2.830138e-03 1.35 1511
693 chr3L 5169415 5170498 1084 * 693 2.830138e-03 1.50 1512
698 chr3L 5769297 5771809 2513 * 698 2.830138e-03 2.16 1513
726 chr3L 7419158 7420773 1616 * 726 2.830138e-03 1.22 1514
745 chr3L 9375688 9378943 3256 * 745 2.830138e-03 1.93 1515
747 chr3L 9409784 9411532 1749 * 747 2.830138e-03 1.43 1516
748 chr3L 9414560 9416477 1918 * 748 2.830138e-03 2.37 1517
756 chr3L 10244604 10248061 3458 * 756 2.830138e-03 1.52 1518
757 chr3L 10266604 10270140 3537 * 757 2.830138e-03 1.41 1519
763 chr3L 10403604 10407311 3708 * 763 2.830138e-03 1.37 1520
766 chr3L 10659250 10661633 2384 * 766 2.830138e-03 2.60 1521
772 chr3L 10839775 10841462 1688 * 772 2.830138e-03 2.25 1522
780 chr3L 11249203 11252944 3742 * 780 2.830138e-03 1.32 1523
791 chr3L 12276367 12278719 2353 * 791 2.830138e-03 1.71 1524
793 chr3L 12299124 12301090 1967 * 793 2.830138e-03 1.57 1525
794 chr3L 12302232 12305387 3156 * 794 2.830138e-03 1.97 1526
796 chr3L 12505972 12507912 1941 * 796 2.830138e-03 2.30 1527
797 chr3L 12514410 12516426 2017 * 797 2.830138e-03 1.86 1528
802 chr3L 12685299 12686885 1587 * 802 2.830138e-03 1.32 1529
814 chr3L 13310438 13314414 3977 * 814 2.830138e-03 1.95 1530
821 chr3L 14002115 14005231 3117 * 821 2.830138e-03 2.34 1531
826 chr3L 14152217 14153569 1353 * 826 2.830138e-03 1.63 1532
837 chr3L 15019249 15022653 3405 * 837 2.830138e-03 2.13 1533
841 chr3L 15352357 15355518 3162 * 841 2.830138e-03 1.56 1534
844 chr3L 15579177 15581200 2024 * 844 2.830138e-03 1.51 1535
845 chr3L 15623157 15625430 2274 * 845 2.830138e-03 1.57 1536
851 chr3L 15823143 15826300 3158 * 851 2.830138e-03 2.62 1537
856 chr3L 16113742 16114613 872 * 856 2.830138e-03 1.76 1538
858 chr3L 16160652 16166145 5494 * 858 2.830138e-03 1.87 1539
867 chr3L 16711851 16713676 1826 * 867 2.830138e-03 1.99 1540
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1730 chrX 23524267 23524641 375 * 1730 7.222037e-03 2.02 1733peak_all <- union_ranges(as_granges(damsel_peaks), as_granges(marshall_peaks)) %>%
data.frame() %>% mutate(compare_num = 1:n())
peak_compare_damsel <- find_overlaps(as_granges(peak_all), as_granges(damsel_peaks)) %>% data.frame()
peak_compare_marshall <- find_overlaps(as_granges(peak_all), as_granges(marshall_peaks)) %>% data.frame()venn_data <- list(Damsel = peak_compare_damsel$compare_num, Marshall = peak_compare_marshall$compare_num)
ggVennDiagram(venn_data)
| Version | Author | Date |
|---|---|---|
| 9c649c4 | caitlinpage | 2024-10-01 |
Compare all 3 approaches
peak_all <- union_ranges(union_ranges(as_granges(damsel_peaks), as_granges(vissers_peaks_mod)), as_granges(marshall_peaks)) %>% data.frame() %>%
mutate(compare_num = 1:n()) %>% as_granges()
peak_compare_damsel <- find_overlaps(as_granges(peak_all), as_granges(damsel_peaks), maxgap = 150) %>% data.frame()
peak_compare_vissers <- find_overlaps(as_granges(peak_all), as_granges(vissers_peaks_mod), maxgap = 150) %>% data.frame()
peak_compare_marshall <- find_overlaps(as_granges(peak_all), as_granges(marshall_peaks), maxgap = 150) %>% data.frame()
venn_data <- list(Damsel = peak_compare_damsel$compare_num, Vissers = peak_compare_vissers$compare_num,
Marshall = peak_compare_marshall$compare_num)
ggVennDiagram(venn_data)
| Version | Author | Date |
|---|---|---|
| 9c649c4 | caitlinpage | 2024-10-01 |
library(export)x11(width = dev.size("in")[[1]], height = dev.size("in")[[1]])
venn_plot <- ggVennDiagram(venn_data)
print(venn_plot)
graph2png(file="../outputvenn_plot.png",
width = dev.size(units="px")[[1]]/40,
height = dev.size(units="px")[[1]]/40,
dpi = 900)Exported graph as ../outputvenn_plot.pngdev.off()X11cairo
3 - what is the overlap with just Damsel’s top 1000 peaks?
- peaks are ranked by FDR
peak_all <- union_ranges(union_ranges(as_granges(damsel_peaks[1:1000,]), as_granges(vissers_peaks_mod)), as_granges(marshall_peaks)) %>% data.frame() %>%
mutate(compare_num = 1:n()) %>% as_granges()
peak_compare_damsel <- find_overlaps(as_granges(peak_all), as_granges(damsel_peaks[1:1000,]), maxgap = 150) %>% data.frame()
peak_compare_vissers <- find_overlaps(as_granges(peak_all), as_granges(vissers_peaks_mod), maxgap = 150) %>% data.frame()
peak_compare_marshall <- find_overlaps(as_granges(peak_all), as_granges(marshall_peaks), maxgap = 150) %>% data.frame()
venn_data <- list(Damsel = peak_compare_damsel$compare_num, Vissers = peak_compare_vissers$compare_num,
Marshall = peak_compare_marshall$compare_num)
ggVennDiagram(venn_data)
| Version | Author | Date |
|---|---|---|
| 9c649c4 | caitlinpage | 2024-10-01 |
overlap still looks pretty good
Vissers’ and Marshall are more similar to each other as they don’t group the samples like Damsel does
try with top 1000 Vissers’ - ranked by logFC which is not ideal but just testing
peak_all <- union_ranges(union_ranges(as_granges(damsel_peaks[1:1000,]), as_granges(vissers_peaks_mod[1:1000,])), as_granges(marshall_peaks)) %>% data.frame() %>%
mutate(compare_num = 1:n()) %>% as_granges()
peak_compare_damsel <- find_overlaps(as_granges(peak_all), as_granges(damsel_peaks[1:1000,]), maxgap = 150) %>% data.frame()
peak_compare_vissers <- find_overlaps(as_granges(peak_all), as_granges(vissers_peaks_mod[1:1000,]), maxgap = 150) %>% data.frame()
peak_compare_marshall <- find_overlaps(as_granges(peak_all), as_granges(marshall_peaks), maxgap = 150) %>% data.frame()
venn_data <- list(Damsel = peak_compare_damsel$compare_num, Vissers = peak_compare_vissers$compare_num,
Marshall = peak_compare_marshall$compare_num)
ggVennDiagram(venn_data)
| Version | Author | Date |
|---|---|---|
| 9c649c4 | caitlinpage | 2024-10-01 |
- interesting that now Damsel has a slightly better overlap to Marshall than Vissers does
peak_all <- union_ranges(union_ranges(as_granges(damsel_peaks[1:1000,]), as_granges(vissers_peaks_mod[1:1000,])), as_granges(marshall_peaks[1:1000,])) %>% data.frame() %>%
mutate(compare_num = 1:n()) %>% as_granges()
peak_compare_damsel <- find_overlaps(as_granges(peak_all), as_granges(damsel_peaks[1:1000,]), maxgap = 150) %>% data.frame()
peak_compare_vissers <- find_overlaps(as_granges(peak_all), as_granges(vissers_peaks_mod[1:1000,]), maxgap = 150) %>% data.frame()
peak_compare_marshall <- find_overlaps(as_granges(peak_all), as_granges(marshall_peaks[1:1000,]), maxgap = 150) %>% data.frame()
venn_data <- list(Damsel = peak_compare_damsel$compare_num, Vissers = peak_compare_vissers$compare_num,
Marshall = peak_compare_marshall$compare_num)
ggVennDiagram(venn_data)
peak_all <- union_ranges(union_ranges(as_granges(damsel_peaks[1:1000,]), as_granges(vissers_peaks_mod)), as_granges(marshall_peaks[1:1000,])) %>% data.frame() %>%
mutate(compare_num = 1:n()) %>% as_granges()
peak_compare_damsel <- find_overlaps(as_granges(peak_all), as_granges(damsel_peaks[1:1000,]), maxgap = 150) %>% data.frame()
peak_compare_vissers <- find_overlaps(as_granges(peak_all), as_granges(vissers_peaks_mod), maxgap = 150) %>% data.frame()
peak_compare_marshall <- find_overlaps(as_granges(peak_all), as_granges(marshall_peaks[1:1000,]), maxgap = 150) %>% data.frame()
venn_data <- list(Damsel = peak_compare_damsel$compare_num, Vissers = peak_compare_vissers$compare_num,
Marshall = peak_compare_marshall$compare_num)
ggVennDiagram(venn_data)
sessionInfo()R Under development (unstable) (2024-01-17 r85813)
Platform: x86_64-apple-darwin20
Running under: macOS Sonoma 14.1.1
Matrix products: default
BLAS: /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/lib/libRblas.0.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/lib/libRlapack.dylib; LAPACK version 3.12.0
locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
time zone: Australia/Melbourne
tzcode source: internal
attached base packages:
[1] stats4 stats graphics grDevices datasets utils methods
[8] base
other attached packages:
[1] export_0.3.0
[2] ggVennDiagram_1.5.2
[3] org.Dm.eg.db_3.19.1
[4] TxDb.Dmelanogaster.UCSC.dm6.ensGene_3.12.0
[5] GenomicFeatures_1.56.0
[6] AnnotationDbi_1.66.0
[7] Biobase_2.64.0
[8] BSgenome.Dmelanogaster.UCSC.dm6_1.4.1
[9] BSgenome_1.72.0
[10] rtracklayer_1.64.0
[11] BiocIO_1.14.0
[12] Biostrings_2.72.1
[13] XVector_0.44.0
[14] ggplot2_3.5.1
[15] tidyr_1.3.1
[16] dplyr_1.1.4
[17] plyranges_1.24.0
[18] GenomicRanges_1.56.1
[19] GenomeInfoDb_1.40.1
[20] IRanges_2.38.1
[21] S4Vectors_0.42.1
[22] BiocGenerics_0.50.0
[23] Damsel_1.0.0
[24] workflowr_1.7.1
loaded via a namespace (and not attached):
[1] rstudioapi_0.16.0 jsonlite_1.8.8
[3] magrittr_2.0.3.9000 farver_2.1.2
[5] rmarkdown_2.27 fs_1.6.4
[7] zlibbioc_1.50.0 ragg_1.3.3
[9] vctrs_0.6.5 memoise_2.0.1
[11] Rsamtools_2.20.0 RCurl_1.98-1.16
[13] base64enc_0.1-3 askpass_1.2.0
[15] htmltools_0.5.8.1 S4Arrays_1.4.1
[17] curl_5.2.1 broom_1.0.6
[19] SparseArray_1.4.8 sass_0.4.9
[21] bslib_0.7.0 htmlwidgets_1.6.4
[23] cachem_1.1.0 uuid_1.2-1
[25] GenomicAlignments_1.40.0 whisker_0.4.1
[27] lifecycle_1.0.4 pkgconfig_2.0.3
[29] Matrix_1.7-0 R6_2.5.1
[31] fastmap_1.2.0 GenomeInfoDbData_1.2.12
[33] MatrixGenerics_1.16.0 digest_0.6.35
[35] colorspace_2.1-1 ps_1.7.6
[37] rprojroot_2.0.4 textshaping_0.4.0
[39] RSQLite_2.3.7 stargazer_5.2.3
[41] labeling_0.4.3 fansi_1.0.6
[43] httr_1.4.7 abind_1.4-5
[45] compiler_4.4.0 bit64_4.0.5
[47] fontquiver_0.2.1 withr_3.0.1
[49] backports_1.5.0 BiocParallel_1.38.0
[51] DBI_1.2.3 highr_0.10
[53] openssl_2.2.0 DelayedArray_0.30.1
[55] devEMF_4.5 rjson_0.2.21
[57] tools_4.4.0 zip_2.3.1
[59] httpuv_1.6.15 glue_1.7.0
[61] restfulr_0.0.15 callr_3.7.6
[63] promises_1.3.0 grid_4.4.0
[65] getPass_0.2-4 generics_0.1.3
[67] gtable_0.3.5 data.table_1.15.4
[69] xml2_1.3.6 utf8_1.2.4
[71] pillar_1.9.0 stringr_1.5.1.9000
[73] later_1.3.2 lattice_0.22-6
[75] renv_1.0.7 bit_4.0.5
[77] tidyselect_1.2.1 rvg_0.3.4
[79] fontLiberation_0.1.0 knitr_1.46
[81] git2r_0.33.0 fontBitstreamVera_0.1.1
[83] SummarizedExperiment_1.34.0 xfun_0.44
[85] matrixStats_1.3.0 stringi_1.8.4
[87] UCSC.utils_1.0.0 yaml_2.3.8
[89] evaluate_0.23 codetools_0.2-20
[91] officer_0.6.6 gdtools_0.4.0
[93] tibble_3.2.1 BiocManager_1.30.23
[95] cli_3.6.2 xtable_1.8-4
[97] systemfonts_1.1.0 munsell_0.5.1
[99] processx_3.8.4 jquerylib_0.1.4
[101] Rcpp_1.0.12 png_0.1-8
[103] XML_3.99-0.17 parallel_4.4.0
[105] rgl_1.3.1 blob_1.2.4
[107] bitops_1.0-8 scales_1.3.0
[109] openxlsx_4.2.7.1 purrr_1.0.2
[111] crayon_1.5.3 flextable_0.9.6
[113] rlang_1.1.3 KEGGREST_1.44.1